Cluster: GH021_63_CGC43
🧬 Cluster Details
- Gene Count: 7
- CAZyme Count: 1
- Substrate: alpha-glucan
- Genome ID: GH021_63
- CGC Family ID: CGCFAM_00010
- Continent: Africa
- Source Study: Maghini et al., 2025 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | k141_70731 | k141_70731_40 | 45709 | 46470 | - | 8.A.3.1.2 |
| TC | k141_70731 | k141_70731_41 | 46471 | 47181 | - | 8.A.3.2.4 |
| NULL(UNKNOWN) | k141_70731 | k141_70731_42 | 47417 | 48082 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| CAZyme | k141_70731 | k141_70731_43 | 48232 | 49713 | - | GH77 |
| TF | k141_70731 | k141_70731_44 | 49733 | 50743 | - | LacI |
| TC | k141_70731 | k141_70731_45 | 50771 | 51619 | - | 3.A.1.1.45 |
| TC | k141_70731 | k141_70731_46 | 51619 | 52470 | - | 3.A.1.1.45 |
Gene ID: k141_70731_40
Type: TC
Location: 45709 - 46470 (-)
Type: TC
Location: 45709 - 46470 (-)
Gene ID: k141_70731_41
Type: TC
Location: 46471 - 47181 (-)
Type: TC
Location: 46471 - 47181 (-)
Gene ID: k141_70731_42
Type:
Location: 47417 - 48082 (-)
Type:
Location: 47417 - 48082 (-)
Gene ID: k141_70731_43
Type: CAZyme
Location: 48232 - 49713 (-)
Type: CAZyme
Location: 48232 - 49713 (-)
Gene ID: k141_70731_44
Type: TF
Location: 49733 - 50743 (-)
Type: TF
Location: 49733 - 50743 (-)
Gene ID: k141_70731_45
Type: TC
Location: 50771 - 51619 (-)
Type: TC
Location: 50771 - 51619 (-)
Gene ID: k141_70731_46
Type: TC
Location: 51619 - 52470 (-)
Type: TC
Location: 51619 - 52470 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Ruminococcaceae
Genus
Gemmiger
Species
Gemmiger variabilis_A
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.