Cluster: GH021_63_CGC19
🧬 Cluster Details
- Gene Count: 6
- CAZyme Count: 1
- Substrate:
- Genome ID: GH021_63
- CGC Family ID: CGCFAM_01859
- Continent: Africa
- Source Study: Maghini et al., 2025 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | k141_153761 | k141_153761_35 | 44702 | 45532 | - | 3.A.1.29.1 |
| TC | k141_153761 | k141_153761_36 | 45522 | 47246 | - | 3.A.1.29.1 |
| TC | k141_153761 | k141_153761_37 | 47847 | 48395 | - | 3.A.1.29.1 |
| STP | k141_153761 | k141_153761_38 | 48517 | 49101 | - | TetR_N |
| TC | k141_153761 | k141_153761_39 | 49098 | 53198 | - | 2.A.6.3.6 |
| CAZyme | k141_153761 | k141_153761_40 | 53658 | 54647 | - | GT2 |
Gene ID: k141_153761_35
Type: TC
Location: 44702 - 45532 (-)
Type: TC
Location: 44702 - 45532 (-)
Gene ID: k141_153761_36
Type: TC
Location: 45522 - 47246 (-)
Type: TC
Location: 45522 - 47246 (-)
Gene ID: k141_153761_37
Type: TC
Location: 47847 - 48395 (-)
Type: TC
Location: 47847 - 48395 (-)
Gene ID: k141_153761_38
Type: STP
Location: 48517 - 49101 (-)
Type: STP
Location: 48517 - 49101 (-)
Gene ID: k141_153761_39
Type: TC
Location: 49098 - 53198 (-)
Type: TC
Location: 49098 - 53198 (-)
Gene ID: k141_153761_40
Type: CAZyme
Location: 53658 - 54647 (-)
Type: CAZyme
Location: 53658 - 54647 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Ruminococcaceae
Genus
Gemmiger
Species
Gemmiger variabilis_A
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.