Cluster: GH021_63_CGC42
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 2
- Substrate: galactan
- Genome ID: GH021_63
- CGC Family ID: CGCFAM_00078
- Continent: Africa
- Source Study: Maghini et al., 2025 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | k141_70731 | k141_70731_23 | 27560 | 29080 | - | 2.A.2.3.2 |
| CAZyme | k141_70731 | k141_70731_24 | 29504 | 31330 | + | GH2 |
| CAZyme | k141_70731 | k141_70731_25 | 31404 | 33638 | + | GH3 |
| TC | k141_70731 | k141_70731_26 | 33789 | 34202 | + | 2.A.7.2.1 |
Gene ID: k141_70731_23
Type: TC
Location: 27560 - 29080 (-)
Type: TC
Location: 27560 - 29080 (-)
Gene ID: k141_70731_24
Type: CAZyme
Location: 29504 - 31330 (+)
Type: CAZyme
Location: 29504 - 31330 (+)
Gene ID: k141_70731_25
Type: CAZyme
Location: 31404 - 33638 (+)
Type: CAZyme
Location: 31404 - 33638 (+)
Gene ID: k141_70731_26
Type: TC
Location: 33789 - 34202 (+)
Type: TC
Location: 33789 - 34202 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Ruminococcaceae
Genus
Gemmiger
Species
Gemmiger variabilis_A
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.