Cluster: GH021_63_CGC22
🧬 Cluster Details
- Gene Count: 5
- CAZyme Count: 2
- Substrate:
- Genome ID: GH021_63
- CGC Family ID: CGCFAM_00008
- Continent: Africa
- Source Study: Maghini et al., 2025 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | k141_39535 | k141_39535_11 | 9413 | 10210 | + | 3.A.1.103.6 |
| TC | k141_39535 | k141_39535_12 | 10225 | 11001 | + | 3.A.1.103.1 |
| CAZyme | k141_39535 | k141_39535_13 | 11008 | 12858 | + | GT2 | GT2 |
| NULL(UNKNOWN) | k141_39535 | k141_39535_14 | 12860 | 13381 | + |
NULL(UNKNOWN)
[View Structural Homologs] |
| CAZyme | k141_39535 | k141_39535_15 | 13378 | 15210 | + | GT2 | GT2 |
Gene ID: k141_39535_11
Type: TC
Location: 9413 - 10210 (+)
Type: TC
Location: 9413 - 10210 (+)
Gene ID: k141_39535_12
Type: TC
Location: 10225 - 11001 (+)
Type: TC
Location: 10225 - 11001 (+)
Gene ID: k141_39535_13
Type: CAZyme
Location: 11008 - 12858 (+)
Type: CAZyme
Location: 11008 - 12858 (+)
Gene ID: k141_39535_14
Type:
Location: 12860 - 13381 (+)
Type:
Location: 12860 - 13381 (+)
Gene ID: k141_39535_15
Type: CAZyme
Location: 13378 - 15210 (+)
Type: CAZyme
Location: 13378 - 15210 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Ruminococcaceae
Genus
Gemmiger
Species
Gemmiger variabilis_A
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.