Cluster: GH021_63_CGC40
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 1
- Substrate:
- Genome ID: GH021_63
- CGC Family ID: CGCFAM_06769
- Continent: Africa
- Source Study: Maghini et al., 2025 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | k141_70731 | k141_70731_6 | 5611 | 7422 | - | 3.A.1.135.6 |
| TC | k141_70731 | k141_70731_7 | 7424 | 9622 | - | 3.A.1.135.6 |
| TF | k141_70731 | k141_70731_8 | 9606 | 10118 | - | MarR |
| CAZyme | k141_70731 | k141_70731_9 | 10254 | 11384 | - | GH3 |
Gene ID: k141_70731_6
Type: TC
Location: 5611 - 7422 (-)
Type: TC
Location: 5611 - 7422 (-)
Gene ID: k141_70731_7
Type: TC
Location: 7424 - 9622 (-)
Type: TC
Location: 7424 - 9622 (-)
Gene ID: k141_70731_8
Type: TF
Location: 9606 - 10118 (-)
Type: TF
Location: 9606 - 10118 (-)
Gene ID: k141_70731_9
Type: CAZyme
Location: 10254 - 11384 (-)
Type: CAZyme
Location: 10254 - 11384 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Ruminococcaceae
Genus
Gemmiger
Species
Gemmiger variabilis_A
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.