Cluster: GH021_63_CGC11
🧬 Cluster Details
- Gene Count: 3
- CAZyme Count: 1
- Substrate:
- Genome ID: GH021_63
- CGC Family ID: CGCFAM_00021
- Continent: Africa
- Source Study: Maghini et al., 2025 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | k141_81201 | k141_81201_13 | 15275 | 16141 | - | 3.A.1.1.29 |
| TC | k141_81201 | k141_81201_14 | 16160 | 17092 | - | 3.A.1.1.10 |
| CAZyme | k141_81201 | k141_81201_15 | 17103 | 18479 | - | GH28 |
Gene ID: k141_81201_13
Type: TC
Location: 15275 - 16141 (-)
Type: TC
Location: 15275 - 16141 (-)
Gene ID: k141_81201_14
Type: TC
Location: 16160 - 17092 (-)
Type: TC
Location: 16160 - 17092 (-)
Gene ID: k141_81201_15
Type: CAZyme
Location: 17103 - 18479 (-)
Type: CAZyme
Location: 17103 - 18479 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Ruminococcaceae
Genus
Gemmiger
Species
Gemmiger variabilis_A
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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Differentially Abundant Genes
| Gene ID | Condition Pair | log2FC | FDR P-value |
|---|---|---|---|
| k141_81201_13 | vegan > omnivore | 1.06276 | 0.03476 |
| k141_81201_14 | vegan > omnivore | 1.22723 | 0.03476 |
| k141_81201_15 | vegan > omnivore | 1.21640 | 0.03476 |