Cluster: GH021_63_CGC35
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 1
- Substrate:
- Genome ID: GH021_63
- CGC Family ID: CGCFAM_00233
- Continent: Africa
- Source Study: Maghini et al., 2025 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | k141_269417 | k141_269417_23 | 32171 | 35395 | + | GH3 |
| TF | k141_269417 | k141_269417_24 | 35519 | 36232 | + | LytTR |
| pfam | k141_269417 | k141_269417_25 | 36245 | 37528 | + | HATPase_c_5 |
| TC | k141_269417 | k141_269417_26 | 37833 | 39395 | + | 2.A.2.1.1 |
Gene ID: k141_269417_23
Type: CAZyme
Location: 32171 - 35395 (+)
Type: CAZyme
Location: 32171 - 35395 (+)
Gene ID: k141_269417_24
Type: TF
Location: 35519 - 36232 (+)
Type: TF
Location: 35519 - 36232 (+)
Gene ID: k141_269417_25
Type: pfam
Location: 36245 - 37528 (+)
Type: pfam
Location: 36245 - 37528 (+)
Gene ID: k141_269417_26
Type: TC
Location: 37833 - 39395 (+)
Type: TC
Location: 37833 - 39395 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Ruminococcaceae
Genus
Gemmiger
Species
Gemmiger variabilis_A
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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Differentially Abundant Genes
| Gene ID | Condition Pair | log2FC | FDR P-value |
|---|---|---|---|
| k141_269417_25 | vegetarian > vegan | 1.27016 | 0.02560 |