Cluster: GH021_63_CGC25
🧬 Cluster Details
- Gene Count: 6
- CAZyme Count: 1
- Substrate:
- Genome ID: GH021_63
- CGC Family ID: CGCFAM_05127
- Continent: Africa
- Source Study: Maghini et al., 2025 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | k141_39535 | k141_39535_92 | 100742 | 102061 | + | GH13_20 |
| pfam | k141_39535 | k141_39535_93 | 102077 | 102856 | + | Hydrolase | S6PP | Hydrolase_3 |
| TC | k141_39535 | k141_39535_94 | 103150 | 103560 | - | 1.A.22.1.8 |
| TC | k141_39535 | k141_39535_95 | 103581 | 104399 | - | 3.A.1.132.3 |
| pfam | k141_39535 | k141_39535_96 | 104563 | 105876 | + | Polysacc_synt |
| TC | k141_39535 | k141_39535_97 | 106341 | 108101 | - | 3.A.1.106.2 |
Gene ID: k141_39535_92
Type: CAZyme
Location: 100742 - 102061 (+)
Type: CAZyme
Location: 100742 - 102061 (+)
Gene ID: k141_39535_93
Type: pfam
Location: 102077 - 102856 (+)
Type: pfam
Location: 102077 - 102856 (+)
Gene ID: k141_39535_94
Type: TC
Location: 103150 - 103560 (-)
Type: TC
Location: 103150 - 103560 (-)
Gene ID: k141_39535_95
Type: TC
Location: 103581 - 104399 (-)
Type: TC
Location: 103581 - 104399 (-)
Gene ID: k141_39535_96
Type: pfam
Location: 104563 - 105876 (+)
Type: pfam
Location: 104563 - 105876 (+)
Gene ID: k141_39535_97
Type: TC
Location: 106341 - 108101 (-)
Type: TC
Location: 106341 - 108101 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Ruminococcaceae
Genus
Gemmiger
Species
Gemmiger variabilis_A
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.