Cluster: GH021_63_CGC41
🧬 Cluster Details
- Gene Count: 7
- CAZyme Count: 3
- Substrate:
- Genome ID: GH021_63
- CGC Family ID: CGCFAM_00047
- Continent: Africa
- Source Study: Maghini et al., 2025 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | k141_70731 | k141_70731_13 | 14189 | 16624 | - | GH94 |
| TF | k141_70731 | k141_70731_14 | 17074 | 18090 | + | LacI |
| NULL(UNKNOWN) | k141_70731 | k141_70731_15 | 18164 | 19609 | + |
NULL(UNKNOWN)
[View Structural Homologs] |
| TC | k141_70731 | k141_70731_16 | 19745 | 20725 | + | 3.A.1.1.4 |
| TC | k141_70731 | k141_70731_17 | 20744 | 21637 | + | 3.A.1.1.48 |
| CAZyme | k141_70731 | k141_70731_18 | 21718 | 23073 | + | GH1 |
| CAZyme | k141_70731 | k141_70731_19 | 23171 | 25417 | - | GH2 |
Gene ID: k141_70731_13
Type: CAZyme
Location: 14189 - 16624 (-)
Type: CAZyme
Location: 14189 - 16624 (-)
Gene ID: k141_70731_14
Type: TF
Location: 17074 - 18090 (+)
Type: TF
Location: 17074 - 18090 (+)
Gene ID: k141_70731_15
Type:
Location: 18164 - 19609 (+)
Type:
Location: 18164 - 19609 (+)
Gene ID: k141_70731_16
Type: TC
Location: 19745 - 20725 (+)
Type: TC
Location: 19745 - 20725 (+)
Gene ID: k141_70731_17
Type: TC
Location: 20744 - 21637 (+)
Type: TC
Location: 20744 - 21637 (+)
Gene ID: k141_70731_18
Type: CAZyme
Location: 21718 - 23073 (+)
Type: CAZyme
Location: 21718 - 23073 (+)
Gene ID: k141_70731_19
Type: CAZyme
Location: 23171 - 25417 (-)
Type: CAZyme
Location: 23171 - 25417 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Ruminococcaceae
Genus
Gemmiger
Species
Gemmiger variabilis_A
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.