Cluster: GH021_63_CGC34
🧬 Cluster Details
- Gene Count: 6
- CAZyme Count: 5
- Substrate:
- Genome ID: GH021_63
- CGC Family ID: CGCFAM_00410
- Continent: Africa
- Source Study: Maghini et al., 2025 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | k141_269417 | k141_269417_11 | 12569 | 14035 | - | GH43_35 |
| CAZyme | k141_269417 | k141_269417_12 | 14059 | 16518 | - | GH3 |
| CAZyme | k141_269417 | k141_269417_13 | 16519 | 18852 | - | GH2 |
| TC | k141_269417 | k141_269417_14 | 18858 | 20549 | - | 2.A.2.3.3 |
| CAZyme | k141_269417 | k141_269417_15 | 20572 | 22695 | - | GH78 |
| CAZyme | k141_269417 | k141_269417_16 | 22811 | 24169 | - | GH1 |
Gene ID: k141_269417_11
Type: CAZyme
Location: 12569 - 14035 (-)
Type: CAZyme
Location: 12569 - 14035 (-)
Gene ID: k141_269417_12
Type: CAZyme
Location: 14059 - 16518 (-)
Type: CAZyme
Location: 14059 - 16518 (-)
Gene ID: k141_269417_13
Type: CAZyme
Location: 16519 - 18852 (-)
Type: CAZyme
Location: 16519 - 18852 (-)
Gene ID: k141_269417_14
Type: TC
Location: 18858 - 20549 (-)
Type: TC
Location: 18858 - 20549 (-)
Gene ID: k141_269417_15
Type: CAZyme
Location: 20572 - 22695 (-)
Type: CAZyme
Location: 20572 - 22695 (-)
Gene ID: k141_269417_16
Type: CAZyme
Location: 22811 - 24169 (-)
Type: CAZyme
Location: 22811 - 24169 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Ruminococcaceae
Genus
Gemmiger
Species
Gemmiger variabilis_A
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.