y
Basic Information | |
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Species | Citrus sinensis |
Cazyme ID | orange1.1g007197m |
Family | GT47 |
Protein Properties | Length: 614 Molecular Weight: 70021.2 Isoelectric Point: 6.6285 |
Chromosome | Chromosome/Scaffold: 00060 Start: 108166 End: 110848 |
Description | Exostosin family protein |
View CDS |
External Links |
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CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
GT47 | 176 | 516 | 0 |
GGRYIYVHDLPSRFNEDMLKDCKSLSLWTNMCKYTANAGLGPPLANTEGVFSNTGWYTTNQFAVDVIFNNRMKQYECLTNDSSIAAAIFVPFYAGFDIAR YLWGYNISMRDAASLDLVNWLTKRPEWGIMGGKDHFLVAGRITWDFRRGSDEESDWGSKLLFLPATKNMSMLVVESSPWGANDFAIPYPTYFHPSKDAEV FDWQNRMRKLERKWLFSFAGAPRPGDPLSIRGQLMEQCRNSEVGKLLECDFGESKCHSPSSIMQMFQTSIFCLQPQGDSYTRRSAFDSILAGCIPVFFHP GSAYTQYTWHLPKNYSSYSVFIPEDDIRKRNVSIEERLKQI |
Full Sequence |
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Protein Sequence Length: 614 Download |
MRRRVAASGP TEQMDKGAGK NHQNRLCFLV TLSAFFWILL LYFHFIVLGT NNVSESNQLE 60 TSIKNSESSF VHLTNDDHLA EPRKEATQPS TFRESTDSQF KPVNPEPTNP EPVVHESPQS 120 QSKPINPEPI VHQSPASQPN PVIPEPISQE SAGHEVKSFP FMKALETIEN KSDPCGGRYI 180 YVHDLPSRFN EDMLKDCKSL SLWTNMCKYT ANAGLGPPLA NTEGVFSNTG WYTTNQFAVD 240 VIFNNRMKQY ECLTNDSSIA AAIFVPFYAG FDIARYLWGY NISMRDAASL DLVNWLTKRP 300 EWGIMGGKDH FLVAGRITWD FRRGSDEESD WGSKLLFLPA TKNMSMLVVE SSPWGANDFA 360 IPYPTYFHPS KDAEVFDWQN RMRKLERKWL FSFAGAPRPG DPLSIRGQLM EQCRNSEVGK 420 LLECDFGESK CHSPSSIMQM FQTSIFCLQP QGDSYTRRSA FDSILAGCIP VFFHPGSAYT 480 QYTWHLPKNY SSYSVFIPED DIRKRNVSIE ERLKQISPEQ IKEMRETVIN LIPRVIYADP 540 RSKLATLKDS FDVAVQSIID RVTRLRRLTI EGLPEYDNFV EQNGWKYALL DEGQRSVGPH 600 EWDPFFSKPK KWR* 660 |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
pfam03016 | Exostosin | 3.0e-69 | 174 | 516 | 359 | + Exostosin family. The EXT family is a family of tumour suppressor genes. Mutations of EXT1 on 8q24.1, EXT2 on 11p11-13, and EXT3 on 19p have been associated with the autosomal dominant disorder known as hereditary multiple exostoses (HME). This is the most common known skeletal dysplasia. The chromosomal locations of other EXT genes suggest association with other forms of neoplasia. EXT1 and EXT2 have both been shown to encode a heparan sulphate polymerase with both D-glucuronyl (GlcA) and N-acetyl-D-glucosaminoglycan (GlcNAC) transferase activities. The nature of the defect in heparan sulphate biosynthesis in HME is unclear. |
Gene Ontology | |
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GO Term | Description |
GO:0016020 | membrane |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
GenBank | AAD21751.1 | 0 | 14 | 610 | 1 | 567 | unknown protein [Arabidopsis thaliana] |
GenBank | ACY08857.1 | 0 | 1 | 610 | 1 | 592 | xyloglucan galactosyltransferase [Eucalyptus grandis] |
DDBJ | BAE98519.1 | 0 | 1 | 610 | 7 | 586 | hypothetical protein [Arabidopsis thaliana] |
RefSeq | NP_179627.2 | 0 | 1 | 610 | 7 | 586 | MUR3 (MURUS 3); catalytic/ transferase, transferring glycosyl groups [Arabidopsis thaliana] |
RefSeq | XP_002301846.1 | 0 | 14 | 610 | 1 | 559 | glycosyltransferase, CAZy family GT47 [Populus trichocarpa] |