y
Basic Information | |
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Species | Arabidopsis lyrata |
Cazyme ID | 339091 |
Family | GT47 |
Protein Properties | Length: 458 Molecular Weight: 53082.9 Isoelectric Point: 8.6142 |
Chromosome | Chromosome/Scaffold: 2 Start: 13114259 End: 13115936 |
Description | Exostosin family protein |
View CDS |
External Links |
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NCBI Taxonomy |
Plaza |
CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
GT47 | 70 | 403 | 0 |
NFTVYVYDLPKEFNIGILQNCRHLNIYTNMCPHVANNGLGQPLYRSGRTSWFATHQFIAEMIFHARVKNHPCRTCEPNNADIFYVPFYGGLYASSVFREQ NLTNRDELAVRLVDYISGQRWWKRSNGRDHFLAIGRTAWDFMRSSDTDDFGANMLMQMPRVKNMSVLTVERQPWKGDNHFGIPYPSYFHPYTSAEMVTWQ DKMRRVDRPNLFSFVGGPRKGLEKAAIRDKLIKQCAESSHCELLKCENGGSRCHDPMTVLGVMARSRFCLQAPGDSYTRRSTFDAMLAGCIPVFFSPHTM YTQYLWYLPDDKRSYSVFMDEKNNTHIEQELLRI |
Full Sequence |
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Protein Sequence Length: 458 Download |
MTYTKRQIKI NHWPEKKDKE KEKYPKNSET IKLIVLTLLL SFSICFLFLI LHFPFTTEFT 60 ASIPRKCYHN FTVYVYDLPK EFNIGILQNC RHLNIYTNMC PHVANNGLGQ PLYRSGRTSW 120 FATHQFIAEM IFHARVKNHP CRTCEPNNAD IFYVPFYGGL YASSVFREQN LTNRDELAVR 180 LVDYISGQRW WKRSNGRDHF LAIGRTAWDF MRSSDTDDFG ANMLMQMPRV KNMSVLTVER 240 QPWKGDNHFG IPYPSYFHPY TSAEMVTWQD KMRRVDRPNL FSFVGGPRKG LEKAAIRDKL 300 IKQCAESSHC ELLKCENGGS RCHDPMTVLG VMARSRFCLQ APGDSYTRRS TFDAMLAGCI 360 PVFFSPHTMY TQYLWYLPDD KRSYSVFMDE KNNTHIEQEL LRISESEVVQ MRETVIDLIP 420 SVTYAHPNAT NYDLPDAVDV ALEALAKQAR DKVVVSL* 480 |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
pfam03016 | Exostosin | 9.0e-79 | 69 | 403 | 349 | + Exostosin family. The EXT family is a family of tumour suppressor genes. Mutations of EXT1 on 8q24.1, EXT2 on 11p11-13, and EXT3 on 19p have been associated with the autosomal dominant disorder known as hereditary multiple exostoses (HME). This is the most common known skeletal dysplasia. The chromosomal locations of other EXT genes suggest association with other forms of neoplasia. EXT1 and EXT2 have both been shown to encode a heparan sulphate polymerase with both D-glucuronyl (GlcA) and N-acetyl-D-glucosaminoglycan (GlcNAC) transferase activities. The nature of the defect in heparan sulphate biosynthesis in HME is unclear. |
Gene Ontology | |
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GO Term | Description |
GO:0016020 | membrane |