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Basic Information | |
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Species | Fragaria vesca |
Cazyme ID | mrna16329.1-v1.0-hybrid |
Family | GT47 |
Protein Properties | Length: 492 Molecular Weight: 55321.5 Isoelectric Point: 7.5782 |
Chromosome | Chromosome/Scaffold: 1 Start: 18698405 End: 18699880 |
Description | Exostosin family protein |
View CDS |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
GT47 | 103 | 427 | 0 |
VSVYVYPLPAKFNIGLLDRCESLNVYTDMCPHVANHGLGQPKPNMGSAAASWFATHQFIAEMIIHARVENHPCRTHDPSRATLFYVPFYGGLYASSKFRE ANLTARDELALELVEHIQSQPTWHKRHGKDHFIALGRTAWDFMRTSDGPDFGANVLLNLPAVKNMSVLTVERQPWQGANQFGIPYPSYFHPSFLPEMLTW QTKMRGAARPHLFSFIGGPRKGLEKAAIRNEFIRQCAESNRCFLMKCGANGASKCHEPSEVLKVMSESQFCLQAPGDSYTRRSTFDSVLAGCIPVFFSPH TAYTQYKWFLPAEASEYSVYIDEKS |
Full Sequence |
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Protein Sequence Length: 492 Download |
MLSRKQTPPD SPWKEKEEKL LYCSKTKEPN LLMTILSNPH LRFGAFVFVF LSAWLLLLLF 60 WFPPKIATTP TTTPNVVDAL LVPDQGTQEQ SQLQVSKCDD PSVSVYVYPL PAKFNIGLLD 120 RCESLNVYTD MCPHVANHGL GQPKPNMGSA AASWFATHQF IAEMIIHARV ENHPCRTHDP 180 SRATLFYVPF YGGLYASSKF REANLTARDE LALELVEHIQ SQPTWHKRHG KDHFIALGRT 240 AWDFMRTSDG PDFGANVLLN LPAVKNMSVL TVERQPWQGA NQFGIPYPSY FHPSFLPEML 300 TWQTKMRGAA RPHLFSFIGG PRKGLEKAAI RNEFIRQCAE SNRCFLMKCG ANGASKCHEP 360 SEVLKVMSES QFCLQAPGDS YTRRSTFDSV LAGCIPVFFS PHTAYTQYKW FLPAEASEYS 420 VYIDEKSEGS KRIEEELLKI PVEKVEMMRE KVIEMIPSLT YAHPNASGLG FKDAVDVVLA 480 SLANHVNNLV N* 540 |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
pfam03016 | Exostosin | 2.0e-65 | 101 | 440 | 354 | + Exostosin family. The EXT family is a family of tumour suppressor genes. Mutations of EXT1 on 8q24.1, EXT2 on 11p11-13, and EXT3 on 19p have been associated with the autosomal dominant disorder known as hereditary multiple exostoses (HME). This is the most common known skeletal dysplasia. The chromosomal locations of other EXT genes suggest association with other forms of neoplasia. EXT1 and EXT2 have both been shown to encode a heparan sulphate polymerase with both D-glucuronyl (GlcA) and N-acetyl-D-glucosaminoglycan (GlcNAC) transferase activities. The nature of the defect in heparan sulphate biosynthesis in HME is unclear. |
Gene Ontology | |
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GO Term | Description |
GO:0016020 | membrane |