y
Basic Information | |
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Species | Manihot esculenta |
Cazyme ID | cassava4.1_022618m |
Family | GT47 |
Protein Properties | Length: 522 Molecular Weight: 60179.7 Isoelectric Point: 7.7863 |
Chromosome | Chromosome/Scaffold: 04443 Start: 60616 End: 62181 |
Description | Exostosin family protein |
View CDS |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
GT47 | 95 | 441 | 0 |
CLGRYVYIHHLPSRFNRDLLENCESITPGAEHNMCSYLVNSALGHEVENSQGILLNKSWYSTNQFLLEVIFHFRMKKYKCLTNDSFLASAIYVPFYAGLD VSRYLWGFKISVRDQSASDLVKWLVEKPEWKKMLGRDHFLVAGRIAWDFRRQTDNESDWGSKFRFLPESNNMSMLAIESSSWNNDYAIPYPTCFHPSRDS EVFQWQDKVRRQTRPYLFSFAGAPRPDLQDSIRGKIIEECLASKNLCKLLECDYGVNGAISCDNPVNVMRLFQNSVFCLQPTGDSYTRRSIFDSILAGCI PVFFHPGTAYAQYKWHLPKNYSKYSVYMPVRDVKDWKAGINQTLLRI |
Full Sequence |
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Protein Sequence Length: 522 Download |
MENPITRNCC NTQLWLVILV SFIFCFVLFG FDYSALIGTQ ERVTVLITDY ENSISTHKSK 60 SLHLPENLNQ TSIGPVKADY LREDNVLPKP VKDSCLGRYV YIHHLPSRFN RDLLENCESI 120 TPGAEHNMCS YLVNSALGHE VENSQGILLN KSWYSTNQFL LEVIFHFRMK KYKCLTNDSF 180 LASAIYVPFY AGLDVSRYLW GFKISVRDQS ASDLVKWLVE KPEWKKMLGR DHFLVAGRIA 240 WDFRRQTDNE SDWGSKFRFL PESNNMSMLA IESSSWNNDY AIPYPTCFHP SRDSEVFQWQ 300 DKVRRQTRPY LFSFAGAPRP DLQDSIRGKI IEECLASKNL CKLLECDYGV NGAISCDNPV 360 NVMRLFQNSV FCLQPTGDSY TRRSIFDSIL AGCIPVFFHP GTAYAQYKWH LPKNYSKYSV 420 YMPVRDVKDW KAGINQTLLR IPENRVLAMR EEVIKLIPRI VYADPRSRME TIEDAFDLAV 480 KGILERIERV RKVTREGKDP SNGFAEGDDY KYTFSGYVGE T* 540 |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
pfam03016 | Exostosin | 4.0e-66 | 94 | 441 | 363 | + Exostosin family. The EXT family is a family of tumour suppressor genes. Mutations of EXT1 on 8q24.1, EXT2 on 11p11-13, and EXT3 on 19p have been associated with the autosomal dominant disorder known as hereditary multiple exostoses (HME). This is the most common known skeletal dysplasia. The chromosomal locations of other EXT genes suggest association with other forms of neoplasia. EXT1 and EXT2 have both been shown to encode a heparan sulphate polymerase with both D-glucuronyl (GlcA) and N-acetyl-D-glucosaminoglycan (GlcNAC) transferase activities. The nature of the defect in heparan sulphate biosynthesis in HME is unclear. |
Gene Ontology | |
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GO Term | Description |
GO:0016020 | membrane |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
EMBL | CAB10178.1 | 0 | 14 | 517 | 23 | 475 | hypothetical protein [Arabidopsis thaliana] |
RefSeq | NP_193135.2 | 0 | 14 | 517 | 31 | 514 | exostosin family protein [Arabidopsis thaliana] |
RefSeq | XP_002300146.1 | 0 | 1 | 521 | 7 | 519 | predicted protein [Populus trichocarpa] |
RefSeq | XP_002321098.1 | 0 | 93 | 516 | 48 | 467 | predicted protein [Populus trichocarpa] |
RefSeq | XP_002532518.1 | 0 | 1 | 521 | 1 | 528 | Xyloglucan galactosyltransferase KATAMARI1, putative [Ricinus communis] |