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Basic Information | |
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Species | Selaginella moellendorffii |
Cazyme ID | 126870 |
Family | GT47 |
Protein Properties | Length: 423 Molecular Weight: 47621.4 Isoelectric Point: 7.7133 |
View CDS |
External Links |
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NCBI Taxonomy |
CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
GT47 | 19 | 356 | 0 |
CQGRNVYVYDLPPKFNADLLKQCETLLPWMSMCDFVRNSGMGLPVSIDAARDFLTPRGSWFKTHQYALEMIFHARILDYSCRVLDPSLADVFYVPYYAGL DVMRSNFMPNVSSAQRDVLGDELMTWLTKQPSTWKTGDRRDHVIALGKISWDFRRMTSDARWGSNLLARADMANVTKLLIERHPWHPNDVGVPHPTFFHP GSDADITTWQARVLRDDVRPSLVAFAGQPRPGQAGSIRGELIRQCTARSDLCRSLDCGSRACFGPEATLGLFLASDFCLQPVGDSPTRRSVFDSLLAGCI PVFFDPFTAYYQYPWHLPSNGSAYSVMIAADSVTDVDI |
Full Sequence |
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Protein Sequence Length: 423 Download |
MQFLRRSGSG QVKKSPQDCQ GRNVYVYDLP PKFNADLLKQ CETLLPWMSM CDFVRNSGMG 60 LPVSIDAARD FLTPRGSWFK THQYALEMIF HARILDYSCR VLDPSLADVF YVPYYAGLDV 120 MRSNFMPNVS SAQRDVLGDE LMTWLTKQPS TWKTGDRRDH VIALGKISWD FRRMTSDARW 180 GSNLLARADM ANVTKLLIER HPWHPNDVGV PHPTFFHPGS DADITTWQAR VLRDDVRPSL 240 VAFAGQPRPG QAGSIRGELI RQCTARSDLC RSLDCGSRAC FGPEATLGLF LASDFCLQPV 300 GDSPTRRSVF DSLLAGCIPV FFDPFTAYYQ YPWHLPSNGS AYSVMIAADS VTDVDIVGEL 360 QKIPFARRKE MRHFIVHEIL PGIVYAQPGS KLEKFEDAFD VAMKNVIARV ASREIYDSSE 420 LR* 480 |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
pfam03016 | Exostosin | 2.0e-57 | 19 | 363 | 360 | + Exostosin family. The EXT family is a family of tumour suppressor genes. Mutations of EXT1 on 8q24.1, EXT2 on 11p11-13, and EXT3 on 19p have been associated with the autosomal dominant disorder known as hereditary multiple exostoses (HME). This is the most common known skeletal dysplasia. The chromosomal locations of other EXT genes suggest association with other forms of neoplasia. EXT1 and EXT2 have both been shown to encode a heparan sulphate polymerase with both D-glucuronyl (GlcA) and N-acetyl-D-glucosaminoglycan (GlcNAC) transferase activities. The nature of the defect in heparan sulphate biosynthesis in HME is unclear. |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
RefSeq | XP_001757088.1 | 0 | 11 | 411 | 18 | 420 | predicted protein [Physcomitrella patens subsp. patens] |
RefSeq | XP_001759310.1 | 0 | 19 | 407 | 2 | 392 | predicted protein [Physcomitrella patens subsp. patens] |
RefSeq | XP_002269913.1 | 0 | 4 | 411 | 137 | 535 | PREDICTED: hypothetical protein [Vitis vinifera] |
RefSeq | XP_002299537.1 | 0 | 19 | 414 | 187 | 573 | predicted protein [Populus trichocarpa] |
RefSeq | XP_002509789.1 | 0 | 15 | 410 | 178 | 563 | Xyloglucan galactosyltransferase KATAMARI1, putative [Ricinus communis] |
EST Download unfiltered results here | ||||
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Hit | Length | Start | End | EValue |
FC340904 | 255 | 14 | 267 | 0 |
DY265125 | 327 | 25 | 343 | 0 |
FC899396 | 320 | 25 | 336 | 0 |
FC346433 | 262 | 110 | 367 | 0 |
EL434952 | 315 | 31 | 344 | 0 |
Sequence Alignments (This image is cropped. Click for full image.) |
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