y
Basic Information | |
---|---|
Species | Populus trichocarpa |
Cazyme ID | Potri.015G132600.1 |
Family | GT47 |
Protein Properties | Length: 517 Molecular Weight: 59804 Isoelectric Point: 9.1929 |
Chromosome | Chromosome/Scaffold: 15 Start: 14292512 End: 14295110 |
Description | glycosyltransferase 18 |
View CDS |
External Links |
---|
NCBI Taxonomy |
Plaza |
CAZyDB |
Signature Domain Download full data set without filtering | |||
---|---|---|---|
Family | Start | End | Evalue |
GT47 | 116 | 459 | 0 |
CEFGKIFVYNLPSALNKELVSNCDELNPWSSSCAALSNDGFGPVATGISSVVPENLSPAWYWTDQFVTEILVHNRILNHKCRTQDPNNATAFYIPFYAGL AVGKSLFFKNSSAKERDFHCEMMLKWVQDQPYFQRNEGWDHFMTMGRISWDFRRSKDKDWGSSCIYKPGMRNITRLLIERNPWDYFDVGVPYPTGFHPRR DNDVVQWQDFVRNRNRKNLFCFAGAKRSKFNNDFRGLLSNHCRNESDSCRVVDCAGSKCSNGTSLILETFLDSAFCLQPRGDSFTRRSIFDCMIAGSIPV LFWKRSAYYQYEWFLPGEPESYSVFIDRNEVKNGTTSIRKVLES |
Full Sequence |
---|
Protein Sequence Length: 517 Download |
MLLPLSNASS SPEPQIKKPK TPPDFQRKDS FKSPKAFLAA HYPSFNQPRI CLFLSVFFIQ 60 ILLLIAFRSL PLSSHHRRQH FPSPFSTRHH QHLNQTVTTI TTATTAPSTV KEESSCEFGK 120 IFVYNLPSAL NKELVSNCDE LNPWSSSCAA LSNDGFGPVA TGISSVVPEN LSPAWYWTDQ 180 FVTEILVHNR ILNHKCRTQD PNNATAFYIP FYAGLAVGKS LFFKNSSAKE RDFHCEMMLK 240 WVQDQPYFQR NEGWDHFMTM GRISWDFRRS KDKDWGSSCI YKPGMRNITR LLIERNPWDY 300 FDVGVPYPTG FHPRRDNDVV QWQDFVRNRN RKNLFCFAGA KRSKFNNDFR GLLSNHCRNE 360 SDSCRVVDCA GSKCSNGTSL ILETFLDSAF CLQPRGDSFT RRSIFDCMIA GSIPVLFWKR 420 SAYYQYEWFL PGEPESYSVF IDRNEVKNGT TSIRKVLESY SEDRIRRMRE KVIEYIPKFV 480 YARPQGGLET IKDAFDVAID RVLRRFKEHE QPGYKW* 540 |
Functional Domains Download unfiltered results here | ||||||||
---|---|---|---|---|---|---|---|---|
Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
pfam03016 | Exostosin | 6.0e-49 | 115 | 460 | 362 | + Exostosin family. The EXT family is a family of tumour suppressor genes. Mutations of EXT1 on 8q24.1, EXT2 on 11p11-13, and EXT3 on 19p have been associated with the autosomal dominant disorder known as hereditary multiple exostoses (HME). This is the most common known skeletal dysplasia. The chromosomal locations of other EXT genes suggest association with other forms of neoplasia. EXT1 and EXT2 have both been shown to encode a heparan sulphate polymerase with both D-glucuronyl (GlcA) and N-acetyl-D-glucosaminoglycan (GlcNAC) transferase activities. The nature of the defect in heparan sulphate biosynthesis in HME is unclear. |
Gene Ontology | |
---|---|
GO Term | Description |
GO:0016020 | membrane |
Annotations - NR Download unfiltered results here | |||||||
---|---|---|---|---|---|---|---|
Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
RefSeq | NP_201028.1 | 0 | 2 | 516 | 1 | 516 | exostosin family protein [Arabidopsis thaliana] |
RefSeq | XP_002270309.1 | 0 | 2 | 516 | 1 | 489 | PREDICTED: hypothetical protein [Vitis vinifera] |
RefSeq | XP_002318866.1 | 0 | 2 | 516 | 1 | 512 | predicted protein [Populus trichocarpa] |
RefSeq | XP_002321855.1 | 0 | 1 | 516 | 1 | 516 | predicted protein [Populus trichocarpa] |
RefSeq | XP_002510893.1 | 0 | 2 | 516 | 1 | 497 | Xyloglucan galactosyltransferase KATAMARI1, putative [Ricinus communis] |