y
Basic Information | |
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Species | Eucalyptus grandis |
Cazyme ID | Eucgr.A01318.1 |
Family | GT47 |
Protein Properties | Length: 618 Molecular Weight: 70870.5 Isoelectric Point: 8.0917 |
Chromosome | Chromosome/Scaffold: 1 Start: 21222118 End: 21224464 |
Description | Exostosin family protein |
View CDS |
External Links |
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CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
GT47 | 158 | 498 | 0 |
GGRYIYVHDLPPRFNEDMLKECRKLSLWTNMCKFTSNAGLGPPLENVEGVFSNTGWYATNQFAVDVIFNNRMKQYDCLTRDSSIAAAIFVPFYAGFDIAR YLWGYNTSVRDAASLDLVNWLAKRPEWNIMGGKDHFLVAGRITWDFRRLSDEETDWGNKLLFLPAARNMSMLVVESSPWNANDFGIPYPTYFHPAKDADV FMWQDRMRNLERKWLFSFAGAPRPDNPKSIRGQIIDQCRNSKVGKLLECDFGESKCHSPSSIMQMFQSSLFCLQPQGDSYTRRSAFDSMLAGCIPVFFHP GSAYTQYTWHLPKNFTKYSVFIPEDDIRKRNVSIEERLRQI |
Full Sequence |
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Protein Sequence Length: 618 Download |
MRRRSSASVG SEQMEKGTAK NQHSRLCFLA TLSLFFWVLL LYFHFVVLGG NPLEESAKLQ 60 PIAVRTEFTP SHRIDDPSSE PRTSATPLTE SHLETPRVVD PPIRETPRVV DPPKRETPRV 120 VDPPKREAPK VVGTKSKMEN FPFMRALRTT ENKTDPCGGR YIYVHDLPPR FNEDMLKECR 180 KLSLWTNMCK FTSNAGLGPP LENVEGVFSN TGWYATNQFA VDVIFNNRMK QYDCLTRDSS 240 IAAAIFVPFY AGFDIARYLW GYNTSVRDAA SLDLVNWLAK RPEWNIMGGK DHFLVAGRIT 300 WDFRRLSDEE TDWGNKLLFL PAARNMSMLV VESSPWNAND FGIPYPTYFH PAKDADVFMW 360 QDRMRNLERK WLFSFAGAPR PDNPKSIRGQ IIDQCRNSKV GKLLECDFGE SKCHSPSSIM 420 QMFQSSLFCL QPQGDSYTRR SAFDSMLAGC IPVFFHPGSA YTQYTWHLPK NFTKYSVFIP 480 EDDIRKRNVS IEERLRQIPP EQVKIMREEV INLIPRLIYA DPRSKLETLK DAFDVAVQAV 540 IDKVTRLRRN IIEGRTEYDN FIEENSWKYA LLEEGEREVG GHEWDPFFSK PKGEGESGGS 600 SAEAAKKSWK NEQRDQS* 660 |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
pfam03016 | Exostosin | 3.0e-71 | 156 | 498 | 359 | + Exostosin family. The EXT family is a family of tumour suppressor genes. Mutations of EXT1 on 8q24.1, EXT2 on 11p11-13, and EXT3 on 19p have been associated with the autosomal dominant disorder known as hereditary multiple exostoses (HME). This is the most common known skeletal dysplasia. The chromosomal locations of other EXT genes suggest association with other forms of neoplasia. EXT1 and EXT2 have both been shown to encode a heparan sulphate polymerase with both D-glucuronyl (GlcA) and N-acetyl-D-glucosaminoglycan (GlcNAC) transferase activities. The nature of the defect in heparan sulphate biosynthesis in HME is unclear. |
Gene Ontology | |
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GO Term | Description |
GO:0016020 | membrane |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
GenBank | ACY08857.1 | 0 | 1 | 617 | 1 | 617 | xyloglucan galactosyltransferase [Eucalyptus grandis] |
DDBJ | BAE98519.1 | 0 | 1 | 617 | 7 | 618 | hypothetical protein [Arabidopsis thaliana] |
RefSeq | NP_179627.2 | 0 | 1 | 617 | 7 | 618 | MUR3 (MURUS 3); catalytic/ transferase, transferring glycosyl groups [Arabidopsis thaliana] |
RefSeq | XP_002269766.1 | 0 | 1 | 603 | 59 | 653 | PREDICTED: hypothetical protein [Vitis vinifera] |
RefSeq | XP_002301846.1 | 0 | 14 | 617 | 1 | 585 | glycosyltransferase, CAZy family GT47 [Populus trichocarpa] |