y
Basic Information | |
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Species | Malus domestica |
Cazyme ID | MDP0000899392 |
Family | GT47 |
Protein Properties | Length: 493 Molecular Weight: 56415.5 Isoelectric Point: 8.1298 |
Chromosome | Chromosome/Scaffold: 02701136 Start: 2550 End: 4028 |
Description | Exostosin family protein |
View CDS |
External Links |
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NCBI Taxonomy |
CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
GT47 | 60 | 404 | 0 |
CFGRYIYIHDHLPARFNYDLLANCHSLSTGSKSLSDQGANTSDNMCPHLVNSGLGPQIEKPGKVLANKSWFLTNPYLLEVIFHNKMKTYKCLTNNSNLAS AIYVPSYTGLDASLHLWNFDLKVRDASAKDLVNWLSRRPQWKKMWGRDHFFVTGRTSWDFRRTSDNGSDWGTNLRFLPESLNMSMLSVEGSCWRNDLPIP YPTNFHPASDSEVVQWQNRVRKYKRHHLFSFVGAPRPGMQNSIRGKLIDQCQASSNCKFVHCGSPGINCNDPVTVMRVFEKSVYCLQPPGDSHTRRSAFD SLLAGCIPVFFHPATAYTQYLWHLPEKHTKYSVFIPVKEVEDLKE |
Full Sequence |
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Protein Sequence Length: 493 Download |
MEKLLAGKCY REVWFGVLVS FFLFFVLLCF DYSTSILDVY HGVDFLVIQH VRPFYIKDSC 60 FGRYIYIHDH LPARFNYDLL ANCHSLSTGS KSLSDQGANT SDNMCPHLVN SGLGPQIEKP 120 GKVLANKSWF LTNPYLLEVI FHNKMKTYKC LTNNSNLASA IYVPSYTGLD ASLHLWNFDL 180 KVRDASAKDL VNWLSRRPQW KKMWGRDHFF VTGRTSWDFR RTSDNGSDWG TNLRFLPESL 240 NMSMLSVEGS CWRNDLPIPY PTNFHPASDS EVVQWQNRVR KYKRHHLFSF VGAPRPGMQN 300 SIRGKLIDQC QASSNCKFVH CGSPGINCND PVTVMRVFEK SVYCLQPPGD SHTRRSAFDS 360 LLAGCIPVFF HPATAYTQYL WHLPEKHTKY SVFIPVKEVE DLKEGMIEKT LLGISNEKAL 420 AMREEVIRLV PKLVYADPRS RLESEDAFDS ALQGILERIE NVRKVIREGK DPSTGFADED 480 WTKFMLAEAP EQ* 540 |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
pfam03016 | Exostosin | 4.0e-56 | 123 | 404 | 298 | + Exostosin family. The EXT family is a family of tumour suppressor genes. Mutations of EXT1 on 8q24.1, EXT2 on 11p11-13, and EXT3 on 19p have been associated with the autosomal dominant disorder known as hereditary multiple exostoses (HME). This is the most common known skeletal dysplasia. The chromosomal locations of other EXT genes suggest association with other forms of neoplasia. EXT1 and EXT2 have both been shown to encode a heparan sulphate polymerase with both D-glucuronyl (GlcA) and N-acetyl-D-glucosaminoglycan (GlcNAC) transferase activities. The nature of the defect in heparan sulphate biosynthesis in HME is unclear. |
Gene Ontology | |
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GO Term | Description |
GO:0016020 | membrane |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
RefSeq | NP_193135.2 | 0 | 13 | 491 | 31 | 516 | exostosin family protein [Arabidopsis thaliana] |
RefSeq | XP_002300146.1 | 0 | 1 | 487 | 7 | 513 | predicted protein [Populus trichocarpa] |
RefSeq | XP_002321098.1 | 0 | 58 | 487 | 48 | 466 | predicted protein [Populus trichocarpa] |
RefSeq | XP_002518609.1 | 0 | 1 | 481 | 1 | 485 | Xyloglucan galactosyltransferase KATAMARI1, putative [Ricinus communis] |
RefSeq | XP_002532518.1 | 0 | 9 | 487 | 10 | 522 | Xyloglucan galactosyltransferase KATAMARI1, putative [Ricinus communis] |