y
Basic Information | |
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Species | Capsella rubella |
Cazyme ID | Carubv10007051m |
Family | GT47 |
Protein Properties | Length: 521 Molecular Weight: 60940.1 Isoelectric Point: 6.3614 |
Chromosome | Chromosome/Scaffold: 7 Start: 10883871 End: 10885433 |
Description | Exostosin family protein |
View CDS |
External Links |
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CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
GT47 | 94 | 435 | 0 |
SCSGRYIYVHDLPYKFNFELLDNCYLITRGTEKDICPYIENYGFGHAIKSYENVLLKESWFTTNQFMLEVIFHNKMMNYRCLTNDSSLASAVFVPFYAGL DMSRYLWGFNISVRDSSSHELMNWLVEQKEWRRMSGRDHFLVSGRIAWDFRRQTDNESDWGSKLRFLPESRNMSMLSIESSSWNNDYAVPYPTCFHPRSV DEVAEWQELMRSRKREYLFAFAGAPRPEYKDSVRGKIIDECLESKKQCYLLDCNYGKTNCDNPVNVMKVFRNSVFCLQPPGDSYTRRSIFDSILAGCIPV FFHPGTAYAQYKWHLPKNHTSYSVYLPVKDVKEWNIKIKERL |
Full Sequence |
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Protein Sequence Length: 521 Download |
MRPKNYSQME KPISTGKYRI NNNNNNNNNH NNVWFIVPLF FILCFVLLCF DYSALFTDTD 60 EPSFSIPDVT QKSIPSEFTK GDNFSRKLDD PSPSCSGRYI YVHDLPYKFN FELLDNCYLI 120 TRGTEKDICP YIENYGFGHA IKSYENVLLK ESWFTTNQFM LEVIFHNKMM NYRCLTNDSS 180 LASAVFVPFY AGLDMSRYLW GFNISVRDSS SHELMNWLVE QKEWRRMSGR DHFLVSGRIA 240 WDFRRQTDNE SDWGSKLRFL PESRNMSMLS IESSSWNNDY AVPYPTCFHP RSVDEVAEWQ 300 ELMRSRKREY LFAFAGAPRP EYKDSVRGKI IDECLESKKQ CYLLDCNYGK TNCDNPVNVM 360 KVFRNSVFCL QPPGDSYTRR SIFDSILAGC IPVFFHPGTA YAQYKWHLPK NHTSYSVYLP 420 VKDVKEWNIK IKERLIEIPE ERVVSLREEV IKLIPRVIYA DPKYGSKGNE DAFELAVKGM 480 LERIEEVREM MRQGKDGSDG FDDSDDYKYT FSPYEPQILA * 540 |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
pfam03016 | Exostosin | 1.0e-76 | 94 | 438 | 360 | + Exostosin family. The EXT family is a family of tumour suppressor genes. Mutations of EXT1 on 8q24.1, EXT2 on 11p11-13, and EXT3 on 19p have been associated with the autosomal dominant disorder known as hereditary multiple exostoses (HME). This is the most common known skeletal dysplasia. The chromosomal locations of other EXT genes suggest association with other forms of neoplasia. EXT1 and EXT2 have both been shown to encode a heparan sulphate polymerase with both D-glucuronyl (GlcA) and N-acetyl-D-glucosaminoglycan (GlcNAC) transferase activities. The nature of the defect in heparan sulphate biosynthesis in HME is unclear. |
Gene Ontology | |
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GO Term | Description |
GO:0016020 | membrane |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
EMBL | CAB10178.1 | 0 | 9 | 520 | 1 | 482 | hypothetical protein [Arabidopsis thaliana] |
RefSeq | NP_193135.2 | 0 | 1 | 520 | 1 | 521 | exostosin family protein [Arabidopsis thaliana] |
RefSeq | XP_002300146.1 | 0 | 30 | 514 | 17 | 515 | predicted protein [Populus trichocarpa] |
RefSeq | XP_002518609.1 | 0 | 29 | 501 | 7 | 480 | Xyloglucan galactosyltransferase KATAMARI1, putative [Ricinus communis] |
RefSeq | XP_002532518.1 | 0 | 9 | 514 | 1 | 524 | Xyloglucan galactosyltransferase KATAMARI1, putative [Ricinus communis] |