y
Basic Information | |
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Species | Malus domestica |
Cazyme ID | MDP0000186840 |
Family | GT47 |
Protein Properties | Length: 1674 Molecular Weight: 191858 Isoelectric Point: 8.6296 |
Chromosome | Chromosome/Scaffold: 008612308 Start: 1544 End: 8414 |
Description | C2 calcium/lipid-binding plant phosphoribosyltransferase family protein |
View CDS |
External Links |
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NCBI Taxonomy |
CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
GT47 | 1284 | 1619 | 0 |
CEGRGVYVYDLPSKFNFDLIGQCRDMVPWMDFCKYFKNEAMGEPIPKFGNGWYQTHQYSLEPIFHQRVMKHPCRVYNEDEAKLFYIPFYGGLDILRWHFK NVSSDVKDTLSLELITWLEKQRSWTKNSRKDHVIVLGKISWDFRRKDRSWGTRFLEIDQMKNPVKLLIERQPWQPNDIGIPHPTSFHPSSDDDIMAWQWK ILSSHRKQLVGFAGAERPGQAESIRSMLIKQCNPSSKNGNQCRFLDCGSGGCDQPETVIDLFLESEFCLQPPGDSPTRKSLFDSLIAGCIPVLFDPFTAY YQYPWHLPEXHGKYSVFVDQEEVRGMKVNVVEMLMK |
Full Sequence |
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Protein Sequence Length: 1674 Download |
MMNNLKLGVD VVGAHNLLPK DGQGSSNAFV ELYFDGQRFR TTIKEKDLNP VWNESFYFNI 60 SDPSNLHYLT LEAYVYNNVK AXYSRSFLGK ISLTGNSFVP YSDAVVLHYP LEKRGIFSRV 120 RGELGLKVYV TDDTSIRSST PVPNAESLAN ADPSAAHGHT EGVPNPVMNA LRNERAGTRH 180 SFHHLPHPSH DEQHQHRASS APDEHYVPKY EADQMKQEQP QPAKLVRMHS AASSQPVDFA 240 LKETSPYLGG GRVVGGRVIH GDKTASTYDL VERMYFLYVR VVKARELPAM DVTGSLDPYV 300 EVRIGNYRGI TKHFEKQQNP TWNQVFAFSK DRMQASVLEV VIKDKDLIKD DFVGLVRFDI 360 NEVPMRVPPD SPLAPEWYRL EDKKGEKIKS ELMLAVWIGT QADEAFSDAW HSDAATPVDS 420 TPAASTLIRS KVYHAPRLWY VRVNVIEAQD LFAAEKNRFP ESYVKVQLGN QVLKTKTLQA 480 RNLNPLWNED LLFVASEPFE DHLIISVEDR VGPGRDEIIG RVILPLNAVD RRADDRMIHS 540 RWFNLEKPVA VDIDQLKRDK FSSRLHLRVC LDGGYHVLDE STHYSSDLRP TAKQLWRPSI 600 GVLELGILNA SGLHPMKTRN EKGTSDTYCV AKYGHKWVRT RTLVDNLSPK YNEQYTWEVF 660 DPATVLTVGV FDNSQLGDKD SHGNKDLKIG KVRVRISTLE AGRIYTHSYP LLVLHPTGVK 720 KMGELHLAIR FSCTSFVNMM FVYSKPLLPK MHYVRPFNIM QLDMLRHQAV NIVAARLGRA 780 EPPLRKEVVE YMSDVDSHLW SMRRSKANFF RLMTVFSGVF AVGKWFTDIC MWKNPITTVL 840 VHVLFLMLVC FPELILPTVF LYMFLIGIWN FRYRPRYPPH MNTKISQAEL VHPDELDEEF 900 DTFPTSKNPE LVRMRYDRLR SVAGRIQTVV GDVATQGERF QALLSWRDPR ASALFVTFCL 960 IAALVMYVTP FQVVAALAGF FMMRHPRFRN RLPSAPINFF RRLPSRTDTE FKVIVNPXFM 1020 CSAEAHQREE QSSTLITCNQ IPNELSNFKD CDTHQSTERC LALIPVVALQ LXRXIRPSPC 1080 KNLKPEAEQV QTSSFLTMVG VSMSKRKPKL PMQPAPKESC SCFLFLFKFL FRVPVAFFIL 1140 LIYLWSSSAT IFSGNIVHIC VSSRKLNDHY CLXAGKTQPK FEIPIPIVNH SSIYLYTLDK 1200 SLNLPLPSSP PLYRGNGSTS PQSTVNGEKV RETAEVIRDE SEPVTMRNGE NKDGEEQVAN 1260 AKKDVEEQMR LHRSWISDKK QAGCEGRGVY VYDLPSKFNF DLIGQCRDMV PWMDFCKYFK 1320 NEAMGEPIPK FGNGWYQTHQ YSLEPIFHQR VMKHPCRVYN EDEAKLFYIP FYGGLDILRW 1380 HFKNVSSDVK DTLSLELITW LEKQRSWTKN SRKDHVIVLG KISWDFRRKD RSWGTRFLEI 1440 DQMKNPVKLL IERQPWQPND IGIPHPTSFH PSSDDDIMAW QWKILSSHRK QLVGFAGAER 1500 PGQAESIRSM LIKQCNPSSK NGNQCRFLDC GSGGCDQPET VIDLFLESEF CLQPPGDSPT 1560 RKSLFDSLIA GCIPVLFDPF TAYYQYPWHL PEXHGKYSVF VDQEEVRGMK VNVVEMLMKI 1620 SKEKRDDMRR FIVYELLPGL VYGDSNAKFE KFEDAFSITM SNLMERVTKL KLNV 1680 |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
cd04019 | C2C_MCTP_PRT_plant | 0.007 | 6 | 63 | 59 | + C2 domain third repeat found in Multiple C2 domain and Transmembrane region Proteins (MCTP); plant subset. MCTPs are involved in Ca2+ signaling at the membrane. Plant-MCTPs are composed of a variable N-terminal sequence, four C2 domains, two transmembrane regions (TMRs), and a short C-terminal sequence. It is one of four protein classes that are anchored to membranes via a transmembrane region; the others being synaptotagmins, extended synaptotagmins, and ferlins. MCTPs are the only membrane-bound C2 domain proteins that contain two functional TMRs. MCTPs are unique in that they bind Ca2+ but not phospholipids. C2 domains fold into an 8-standed beta-sandwich that can adopt 2 structural arrangements: Type I and Type II, distinguished by a circular permutation involving their N- and C-terminal beta strands. Many C2 domains are Ca2+-dependent membrane-targeting modules that bind a wide variety of substances including bind phospholipids, inositol polyphosphates, and intracellular proteins. Most C2 domain proteins are either signal transduction enzymes that contain a single C2 domain, such as protein kinase C, or membrane trafficking proteins which contain at least two C2 domains, such as synaptotagmin 1. However, there are a few exceptions to this including RIM isoforms and some splice variants of piccolo/aczonin and intersectin which only have a single C2 domain. C2 domains with a calcium binding region have negatively charged residues, primarily aspartates, that serve as ligands for calcium ions. This cd contains the third C2 repeat, C2C, and has a type-II topology. | ||
cd04022 | C2A_MCTP_PRT_plant | 4.0e-64 | 6 | 132 | 127 | + C2 domain first repeat found in Multiple C2 domain and Transmembrane region Proteins (MCTP); plant subset. MCTPs are involved in Ca2+ signaling at the membrane. Plant-MCTPs are composed of a variable N-terminal sequence, four C2 domains, two transmembrane regions (TMRs), and a short C-terminal sequence. It is one of four protein classes that are anchored to membranes via a transmembrane region; the others being synaptotagmins, extended synaptotagmins, and ferlins. MCTPs are the only membrane-bound C2 domain proteins that contain two functional TMRs. MCTPs are unique in that they bind Ca2+ but not phospholipids. C2 domains fold into an 8-standed beta-sandwich that can adopt 2 structural arrangements: Type I and Type II, distinguished by a circular permutation involving their N- and C-terminal beta strands. Many C2 domains are Ca2+-dependent membrane-targeting modules that bind a wide variety of substances including bind phospholipids, inositol polyphosphates, and intracellular proteins. Most C2 domain proteins are either signal transduction enzymes that contain a single C2 domain, such as protein kinase C, or membrane trafficking proteins which contain at least two C2 domains, such as synaptotagmin 1. However, there are a few exceptions to this including RIM isoforms and some splice variants of piccolo/aczonin and intersectin which only have a single C2 domain. C2 domains with a calcium binding region have negatively charged residues, primarily aspartates, that serve as ligands for calcium ions. This cd contains the first C2 repeat, C2A, and has a type-II topology. | ||
cd04019 | C2C_MCTP_PRT_plant | 4.0e-82 | 440 | 590 | 151 | + C2 domain third repeat found in Multiple C2 domain and Transmembrane region Proteins (MCTP); plant subset. MCTPs are involved in Ca2+ signaling at the membrane. Plant-MCTPs are composed of a variable N-terminal sequence, four C2 domains, two transmembrane regions (TMRs), and a short C-terminal sequence. It is one of four protein classes that are anchored to membranes via a transmembrane region; the others being synaptotagmins, extended synaptotagmins, and ferlins. MCTPs are the only membrane-bound C2 domain proteins that contain two functional TMRs. MCTPs are unique in that they bind Ca2+ but not phospholipids. C2 domains fold into an 8-standed beta-sandwich that can adopt 2 structural arrangements: Type I and Type II, distinguished by a circular permutation involving their N- and C-terminal beta strands. Many C2 domains are Ca2+-dependent membrane-targeting modules that bind a wide variety of substances including bind phospholipids, inositol polyphosphates, and intracellular proteins. Most C2 domain proteins are either signal transduction enzymes that contain a single C2 domain, such as protein kinase C, or membrane trafficking proteins which contain at least two C2 domains, such as synaptotagmin 1. However, there are a few exceptions to this including RIM isoforms and some splice variants of piccolo/aczonin and intersectin which only have a single C2 domain. C2 domains with a calcium binding region have negatively charged residues, primarily aspartates, that serve as ligands for calcium ions. This cd contains the third C2 repeat, C2C, and has a type-II topology. | ||
pfam08372 | PRT_C | 3.0e-101 | 856 | 1008 | 153 | + Plant phosphoribosyltransferase C-terminal. This domain is found at the C-terminus of phosphoribosyltransferases and phosphoribosyltransferase-like proteins. It contains putative transmembrane regions. It often appears together with calcium-ion dependent C2 domains (pfam00168). |
Gene Ontology | |
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GO Term | Description |
GO:0005515 | protein binding |
GO:0016020 | membrane |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
RefSeq | NP_192898.2 | 0 | 1 | 1009 | 2 | 1009 | C2 domain-containing protein [Arabidopsis thaliana] |
RefSeq | XP_002272722.1 | 0 | 2 | 1009 | 1 | 1000 | PREDICTED: hypothetical protein [Vitis vinifera] |
RefSeq | XP_002303582.1 | 0 | 1 | 1009 | 1 | 1007 | predicted protein [Populus trichocarpa] |
RefSeq | XP_002509788.1 | 0 | 2 | 1009 | 1 | 978 | synaptotagmin, putative [Ricinus communis] |
RefSeq | XP_002511838.1 | 0 | 2 | 1009 | 1 | 1015 | synaptotagmin, putative [Ricinus communis] |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 3hn8_C | 0.000000002 | 277 | 520 | 23 | 240 | A Chain A, Crystal Structure Of Synaptotagmin |
PDB | 3hn8_B | 0.000000002 | 277 | 520 | 23 | 240 | A Chain A, Crystal Structure Of Synaptotagmin |