y
Basic Information | |
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Species | Linum usitatissimum |
Cazyme ID | Lus10027386 |
Family | GT47 |
Protein Properties | Length: 521 Molecular Weight: 59511.4 Isoelectric Point: 7.8645 |
Chromosome | Chromosome/Scaffold: 96 Start: 4443 End: 6005 |
Description | glycosyltransferase 18 |
View CDS |
External Links |
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CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
GT47 | 121 | 462 | 0 |
CKNGYVFVYDLPSNLNYDLIHNCEKLNPWSSRCDALANDGFGQQASAGVSGIVPEELAPAWYWTDQFVSEIVYHNRMMKHRCRTTDPSNATAFYIPFYAG LAVGRFLWQNFSHQDRDLHCEEMLRWIQDQEYFKRSDGWDHFLTMGRITWDFRRSEENDWGSRCIYLPGMRNITRLLIERNPWDYFDVGVPYPTGFHPRS DSDVVSWQEFVRSRNRSTLFSFAGASRKSFKNDFREILINHCIIESDACRIVNCGGSKCANGSAAILQTFLDSDFCLQPRGDSFTRRSIFDCMVAGSIPV VFWRRTAYYQYEWFLPGEPGSYSVFIHRNNVKNGTSIRKVLD |
Full Sequence |
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Protein Sequence Length: 521 Download |
MLPIVDPPPP EPADIRKKPK FDDKIGRKNS FSSLTSLLKH AHLSHPRSWL LISVLFIQIL 60 LLLTLRSVPF PFTFLRHVDS DSSPSSSISS SSSPLPAAVV SAPLVNSISA ASATTAAAAD 120 CKNGYVFVYD LPSNLNYDLI HNCEKLNPWS SRCDALANDG FGQQASAGVS GIVPEELAPA 180 WYWTDQFVSE IVYHNRMMKH RCRTTDPSNA TAFYIPFYAG LAVGRFLWQN FSHQDRDLHC 240 EEMLRWIQDQ EYFKRSDGWD HFLTMGRITW DFRRSEENDW GSRCIYLPGM RNITRLLIER 300 NPWDYFDVGV PYPTGFHPRS DSDVVSWQEF VRSRNRSTLF SFAGASRKSF KNDFREILIN 360 HCIIESDACR IVNCGGSKCA NGSAAILQTF LDSDFCLQPR GDSFTRRSIF DCMVAGSIPV 420 VFWRRTAYYQ YEWFLPGEPG SYSVFIHRNN VKNGTSIRKV LDGYSREEVR KMREKVIEYI 480 PKLVYARSSD GLETIKDAFD VAIDGVLRRF EEQKEFGYKW * 540 |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
pfam03016 | Exostosin | 8.0e-49 | 121 | 461 | 356 | + Exostosin family. The EXT family is a family of tumour suppressor genes. Mutations of EXT1 on 8q24.1, EXT2 on 11p11-13, and EXT3 on 19p have been associated with the autosomal dominant disorder known as hereditary multiple exostoses (HME). This is the most common known skeletal dysplasia. The chromosomal locations of other EXT genes suggest association with other forms of neoplasia. EXT1 and EXT2 have both been shown to encode a heparan sulphate polymerase with both D-glucuronyl (GlcA) and N-acetyl-D-glucosaminoglycan (GlcNAC) transferase activities. The nature of the defect in heparan sulphate biosynthesis in HME is unclear. |
Gene Ontology | |
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GO Term | Description |
GO:0016020 | membrane |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
RefSeq | NP_201028.1 | 0 | 1 | 520 | 1 | 516 | exostosin family protein [Arabidopsis thaliana] |
RefSeq | XP_002270309.1 | 0 | 1 | 520 | 1 | 489 | PREDICTED: hypothetical protein [Vitis vinifera] |
RefSeq | XP_002318866.1 | 0 | 1 | 520 | 1 | 512 | predicted protein [Populus trichocarpa] |
RefSeq | XP_002321855.1 | 0 | 10 | 520 | 12 | 516 | predicted protein [Populus trichocarpa] |
RefSeq | XP_002510893.1 | 0 | 1 | 520 | 1 | 497 | Xyloglucan galactosyltransferase KATAMARI1, putative [Ricinus communis] |
EST Download unfiltered results here | ||||
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Hit | Length | Start | End | EValue |
EX720039 | 272 | 197 | 468 | 0 |
DY290373 | 366 | 138 | 502 | 0 |
DY267021 | 344 | 160 | 502 | 0 |
JG228298 | 232 | 290 | 521 | 0 |
JG068579 | 232 | 290 | 521 | 0 |
Sequence Alignments (This image is cropped. Click for full image.) |
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