y
Basic Information | |
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Species | Capsella rubella |
Cazyme ID | Carubv10025159m |
Family | GT47 |
Protein Properties | Length: 712 Molecular Weight: 82846.8 Isoelectric Point: 7.5112 |
Chromosome | Chromosome/Scaffold: 4 Start: 7078844 End: 7081387 |
Description | Exostosin family protein |
View CDS |
External Links |
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CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
GT47 | 280 | 619 | 0 |
CKGKYVYMHEVPALFNEELLKNCWTLSRWTDMCELTSNFGLGPRLPNMEGVSGWYATNQFTLEVIFHNRMKQYKCLTKDSSLASAVFVPYYPGLDLMRFL WGPFPSMRDAAALDLMKWLRESQEWKRLDGRDHFMVAGRTTWDFMRTPENESDWGNRLMILPEVRNMTMLLIESSPWNYHGFAVPYPTYFHPSTYAEIIQ WQMRMRRMNRRYLFSFVGAPRPNLGDSIRTEIMDQCKASKSKCKLLECVSGSQKCYKPDQIMKFFLSSTFCLQPPGDSYTRRSTFDSILAGCIPVFFHPG SAYAQYVWHLPKDIAKYSVFIPEKNVKEGKVSIENILSRI |
Full Sequence |
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Protein Sequence Length: 712 Download |
MAMEKSSSKY RTQFWYVAMA SFLLWLVLLY LFSSSAKTVH NHERLFRQEN IIDLPVENVA 60 QNHESYEAPV VVSEAISVDN SSLPVSVDSS PVVDQMSEDK KVVTDLVEEL EKERVEKEKK 120 RVDTVVTGRS SRTRRGNRES RKTRSSGRLE ADMKRVRRSI DDDESNLEEN SVENHQSSDK 180 EPNYFESKTN VEPKKEQVDD NDEDLENKKG KELENDGSDN DLQGDDNTAK IVSKPKTQRN 240 YASSNSTSQA KTRVNTKRNQ PKKDQKVMLQ PIETRRNDPC KGKYVYMHEV PALFNEELLK 300 NCWTLSRWTD MCELTSNFGL GPRLPNMEGV SGWYATNQFT LEVIFHNRMK QYKCLTKDSS 360 LASAVFVPYY PGLDLMRFLW GPFPSMRDAA ALDLMKWLRE SQEWKRLDGR DHFMVAGRTT 420 WDFMRTPENE SDWGNRLMIL PEVRNMTMLL IESSPWNYHG FAVPYPTYFH PSTYAEIIQW 480 QMRMRRMNRR YLFSFVGAPR PNLGDSIRTE IMDQCKASKS KCKLLECVSG SQKCYKPDQI 540 MKFFLSSTFC LQPPGDSYTR RSTFDSILAG CIPVFFHPGS AYAQYVWHLP KDIAKYSVFI 600 PEKNVKEGKV SIENILSRIP RTRIFAMREQ VIRLIPRLMY FNPLSKSEDT GRFEDAFDVA 660 VEGVLQRVDG LRKRIEEGNE EIFDFPEQYS WKYNVFGNVE KHEWDSYFDR P* 720 |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
PRK08581 | PRK08581 | 0.005 | 158 | 266 | 113 | + N-acetylmuramoyl-L-alanine amidase; Validated | ||
pfam03016 | Exostosin | 1.0e-64 | 279 | 619 | 354 | + Exostosin family. The EXT family is a family of tumour suppressor genes. Mutations of EXT1 on 8q24.1, EXT2 on 11p11-13, and EXT3 on 19p have been associated with the autosomal dominant disorder known as hereditary multiple exostoses (HME). This is the most common known skeletal dysplasia. The chromosomal locations of other EXT genes suggest association with other forms of neoplasia. EXT1 and EXT2 have both been shown to encode a heparan sulphate polymerase with both D-glucuronyl (GlcA) and N-acetyl-D-glucosaminoglycan (GlcNAC) transferase activities. The nature of the defect in heparan sulphate biosynthesis in HME is unclear. |
Gene Ontology | |
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GO Term | Description |
GO:0016020 | membrane |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
GenBank | ACY08857.1 | 0 | 228 | 711 | 106 | 591 | xyloglucan galactosyltransferase [Eucalyptus grandis] |
RefSeq | NP_180468.1 | 0 | 1 | 711 | 1 | 720 | exostosin family protein [Arabidopsis thaliana] |
RefSeq | XP_002280815.1 | 0 | 273 | 710 | 86 | 523 | PREDICTED: hypothetical protein [Vitis vinifera] |
RefSeq | XP_002301846.1 | 0 | 219 | 711 | 68 | 558 | glycosyltransferase, CAZy family GT47 [Populus trichocarpa] |
RefSeq | XP_002313430.1 | 0 | 260 | 710 | 120 | 569 | glycosyltransferase, CAZy family GT47 [Populus trichocarpa] |