y
Basic Information | |
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Species | Arabidopsis lyrata |
Cazyme ID | 893098 |
Family | GT47 |
Protein Properties | Length: 454 Molecular Weight: 52359.5 Isoelectric Point: 8.3043 |
View CDS |
External Links |
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NCBI Taxonomy |
Plaza |
CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
GT47 | 253 | 446 | 3.8e-36 |
SCEGKEVYVYDLPSKFNKDLLGQCSDMVPWANFCSYFKNDAFGDLIENLGIGWFRTHQYALEPIFHSRVLKHPCRVHDETQAKLFYVPFYGGIDVLRWHF KNVSEDVKDVLAIEVVKWLGSKKSWRKNAGKDHVFVLGKISWDFRRNDKFSWGSSLLEMQEMKNPTKLLIERNPWDVNDIAIPHPTYFHPKTDN |
Full Sequence |
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Protein Sequence Length: 454 Download |
MPVSISKRRP RTSKKTETEK SEKTLKDSRT CCNNICSIFS RSILYRVPLT IIFLFLIYLW 60 STSTTAISGH VVHICISSRK LNDRYCLTAG TQPALRVPVN NFTKPVSEDV VRRKEEKNVV 120 VLGKDGDKGF AKNETFVGER DSDKSTVGTS LNVIKNDTST GEIFRERVFV LDQDSKPIHE 180 ENLDSVLDQD SNPKNEIDRD VFVDWDPETG EERYRYFKSK DESEETALKA VDKYLQIQRS 240 WLSMGSNRGK PGSCEGKEVY VYDLPSKFNK DLLGQCSDMV PWANFCSYFK NDAFGDLIEN 300 LGIGWFRTHQ YALEPIFHSR VLKHPCRVHD ETQAKLFYVP FYGGIDVLRW HFKNVSEDVK 360 DVLAIEVVKW LGSKKSWRKN AGKDHVFVLG KISWDFRRND KFSWGSSLLE MQEMKNPTKL 420 LIERNPWDVN DIAIPHPTYF HPKTDNDIAI WLR* 480 |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
pfam03016 | Exostosin | 2.0e-31 | 253 | 447 | 202 | + Exostosin family. The EXT family is a family of tumour suppressor genes. Mutations of EXT1 on 8q24.1, EXT2 on 11p11-13, and EXT3 on 19p have been associated with the autosomal dominant disorder known as hereditary multiple exostoses (HME). This is the most common known skeletal dysplasia. The chromosomal locations of other EXT genes suggest association with other forms of neoplasia. EXT1 and EXT2 have both been shown to encode a heparan sulphate polymerase with both D-glucuronyl (GlcA) and N-acetyl-D-glucosaminoglycan (GlcNAC) transferase activities. The nature of the defect in heparan sulphate biosynthesis in HME is unclear. |
Gene Ontology | |
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GO Term | Description |
GO:0016020 | membrane |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
RefSeq | NP_176534.2 | 0 | 1 | 451 | 24 | 476 | catalytic [Arabidopsis thaliana] |
RefSeq | NP_198941.1 | 0 | 5 | 451 | 2 | 373 | exostosin family protein [Arabidopsis thaliana] |
RefSeq | XP_002269913.1 | 0 | 200 | 451 | 105 | 349 | PREDICTED: hypothetical protein [Vitis vinifera] |
RefSeq | XP_002299537.1 | 0 | 1 | 451 | 1 | 384 | predicted protein [Populus trichocarpa] |
RefSeq | XP_002509789.1 | 0 | 70 | 451 | 58 | 379 | Xyloglucan galactosyltransferase KATAMARI1, putative [Ricinus communis] |