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Genome Details

Selected Rep_genome_ID: Rep_553
Total Genomes Found: 1
Read Mapping - JBrowse
Taxonomic Lineage
Domain
Bacteria
→
Phylum
Bacteroidota
→
Class
Bacteroidia
→
Order
Bacteroidales
→
Family
Tannerellaceae
→
Genus
Parabacteroides
→
Species
Parabacteroides sp900541965
Genomes Table
Genome ID Genome Length Completeness Contamination Country Continent Source
Rep_553 4,648,473 98.7762% 0.705128% NA NA WIS
Analysis Charts
CGCs
Gene Cluster ID Family Name In Labeled Family Gene Count CAZyme Count Substrate
Rep_553_CGC10 CGCFAM_00001 Yes 5 2 pectin/galactan/beta-glucan/xylan/beta-mannan/host glycan
Rep_553_CGC56 CGCFAM_00001 Yes 8 2 pectin/galactan/beta-glucan/xylan/beta-mannan/host glycan
Rep_553_CGC67 CGCFAM_00001 Yes 5 3 pectin/galactan/beta-glucan/xylan/beta-mannan/host glycan
Rep_553_CGC73 CGCFAM_00001 Yes 3 1 pectin/galactan/beta-glucan/xylan/beta-mannan/host glycan
Rep_553_CGC74 CGCFAM_00001 Yes 7 3 pectin/galactan/beta-glucan/xylan/beta-mannan/host glycan
Rep_553_CGC78 CGCFAM_00005 Yes 7 4
Rep_553_CGC53 CGCFAM_00007 Yes 11 2
Rep_553_CGC2 CGCFAM_00018 Yes 9 4
Rep_553_CGC60 CGCFAM_00030 Yes 3 1
Rep_553_CGC41 CGCFAM_00120 Yes 6 3
Rep_553_CGC77 CGCFAM_00132 Yes 4 1
Rep_553_CGC5 CGCFAM_00151 Yes 8 6
Rep_553_CGC37 CGCFAM_00158 Yes 11 5
Rep_553_CGC66 CGCFAM_00301 Yes 7 1
Rep_553_CGC11 CGCFAM_00375 Yes 7 1
Rep_553_CGC79 CGCFAM_00436 Yes 6 1
Rep_553_CGC39 CGCFAM_00461 Yes 8 3
Rep_553_CGC40 CGCFAM_00485 Yes 8 3 galactan/pectin/host glycan
Rep_553_CGC3 CGCFAM_00623 Yes 3 1
Rep_553_CGC43 CGCFAM_00759 Yes 3 1
Rep_553_CGC17 CGCFAM_01021 Yes 9 3
Rep_553_CGC44 CGCFAM_01022 Yes 12 4
Rep_553_CGC31 CGCFAM_01748 Yes 9 1
Rep_553_CGC55 CGCFAM_02870 Yes 3 1
Rep_553_CGC57 CGCFAM_05370 Yes 10 6
Top CAZyme Families