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Cluster: Rep_553_CGC57

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme Rep_553_c_38 Rep_553_c_38_2 832 3126 - GH92
CAZyme Rep_553_c_38 Rep_553_c_38_3 3169 5109 - CE20 | CE20
CAZyme Rep_553_c_38 Rep_553_c_38_4 5150 7474 - GH92
CAZyme Rep_553_c_38 Rep_553_c_38_5 7489 9990 - GH38
pfam Rep_553_c_38 Rep_553_c_38_6 10020 11405 - Lipase_GDSL | Lipase_GDSL_2
CAZyme Rep_553_c_38 Rep_553_c_38_7 11411 12562 - GH130_3
CAZyme Rep_553_c_38 Rep_553_c_38_8 12703 14862 - GH92
pfam Rep_553_c_38 Rep_553_c_38_9 14990 15763 - DUF3823 | DUF3823_C
pfam Rep_553_c_38 Rep_553_c_38_10 15782 17593 - SusD_RagB | SusD-like_3
TC Rep_553_c_38 Rep_553_c_38_11 17605 21006 - 1.B.14.6.1
Gene ID: Rep_553_c_38_2
Type: CAZyme
Location: 832 - 3126 (-)
Gene ID: Rep_553_c_38_3
Type: CAZyme
Location: 3169 - 5109 (-)
Gene ID: Rep_553_c_38_4
Type: CAZyme
Location: 5150 - 7474 (-)
Gene ID: Rep_553_c_38_5
Type: CAZyme
Location: 7489 - 9990 (-)
Gene ID: Rep_553_c_38_6
Type: pfam
Location: 10020 - 11405 (-)
Gene ID: Rep_553_c_38_7
Type: CAZyme
Location: 11411 - 12562 (-)
Gene ID: Rep_553_c_38_8
Type: CAZyme
Location: 12703 - 14862 (-)
Gene ID: Rep_553_c_38_9
Type: pfam
Location: 14990 - 15763 (-)
Gene ID: Rep_553_c_38_10
Type: pfam
Location: 15782 - 17593 (-)
Gene ID: Rep_553_c_38_11
Type: TC
Location: 17605 - 21006 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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