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Cluster: Rep_553_CGC5

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC Rep_553_c_1 Rep_553_c_1_50 61598 64102 - 9.B.144.1.4
CAZyme Rep_553_c_1 Rep_553_c_1_51 64207 65304 + GT4
TC Rep_553_c_1 Rep_553_c_1_52 65299 66663 - 2.A.2.6.3
CAZyme Rep_553_c_1 Rep_553_c_1_53 66925 67872 - GT23
CAZyme Rep_553_c_1 Rep_553_c_1_54 67874 68806 - GT10
CAZyme Rep_553_c_1 Rep_553_c_1_55 68815 69789 - GT2
CAZyme Rep_553_c_1 Rep_553_c_1_56 69786 70685 - GT11
CAZyme Rep_553_c_1 Rep_553_c_1_57 70690 71583 - GT2
Gene ID: Rep_553_c_1_50
Type: TC
Location: 61598 - 64102 (-)
Gene ID: Rep_553_c_1_51
Type: CAZyme
Location: 64207 - 65304 (+)
Gene ID: Rep_553_c_1_52
Type: TC
Location: 65299 - 66663 (-)
Gene ID: Rep_553_c_1_53
Type: CAZyme
Location: 66925 - 67872 (-)
Gene ID: Rep_553_c_1_54
Type: CAZyme
Location: 67874 - 68806 (-)
Gene ID: Rep_553_c_1_55
Type: CAZyme
Location: 68815 - 69789 (-)
Gene ID: Rep_553_c_1_56
Type: CAZyme
Location: 69786 - 70685 (-)
Gene ID: Rep_553_c_1_57
Type: CAZyme
Location: 70690 - 71583 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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