Cluster: Rep_553_CGC66
🧬 Cluster Details
- Gene Count: 7
- CAZyme Count: 1
- Substrate:
- Genome ID: Rep_553
- CGC Family ID: CGCFAM_00301
- Continent: NA
- Source Study: Leviatan et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | Rep_553_c_47 | Rep_553_c_47_20 | 18173 | 19213 | - | GT2 |
| NULL(UNKNOWN) | Rep_553_c_47 | Rep_553_c_47_21 | 19227 | 20636 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| NULL(UNKNOWN) | Rep_553_c_47 | Rep_553_c_47_22 | 20623 | 21960 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| TC | Rep_553_c_47 | Rep_553_c_47_23 | 21998 | 24412 | - | 8.A.3.3.4 |
| pfam | Rep_553_c_47 | Rep_553_c_47_24 | 24437 | 25234 | - | Poly_export | SLBB | SLBB_2 |
| NULL(UNKNOWN) | Rep_553_c_47 | Rep_553_c_47_25 | 25261 | 25689 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| TC | Rep_553_c_47 | Rep_553_c_47_26 | 25777 | 27276 | - | 9.B.18.1.1 |
Gene ID: Rep_553_c_47_20
Type: CAZyme
Location: 18173 - 19213 (-)
Type: CAZyme
Location: 18173 - 19213 (-)
Gene ID: Rep_553_c_47_21
Type:
Location: 19227 - 20636 (-)
Type:
Location: 19227 - 20636 (-)
Gene ID: Rep_553_c_47_22
Type:
Location: 20623 - 21960 (-)
Type:
Location: 20623 - 21960 (-)
Gene ID: Rep_553_c_47_23
Type: TC
Location: 21998 - 24412 (-)
Type: TC
Location: 21998 - 24412 (-)
Gene ID: Rep_553_c_47_24
Type: pfam
Location: 24437 - 25234 (-)
Type: pfam
Location: 24437 - 25234 (-)
Gene ID: Rep_553_c_47_25
Type:
Location: 25261 - 25689 (-)
Type:
Location: 25261 - 25689 (-)
Gene ID: Rep_553_c_47_26
Type: TC
Location: 25777 - 27276 (-)
Type: TC
Location: 25777 - 27276 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Tannerellaceae
Genus
Parabacteroides
Species
Parabacteroides sp900541965
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.