PROTEIN: Rep_553_c_47_21
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Protein File & Metadata
Source:
Rep_553_c_47_21.pdb
Genome ID:
Protein ID:
Rep_553_c_47_21
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Detailed structural information will appear here after analysis...
Protein Sequence
MPLNKSDIRR NILYAFGAQV VSLVLSIIMT LIVPKILGVK AFSYWQLFIF YTSYGGFLHL 60 GLYDGIYLRF GGVSYKELNY VMLGWQFAIS MIWQIIICFI ISLFTYIYIT GDRVFIIVSS 120 CLCILISNSI FFFGYILQAV NNIKYYSISI MIEKMLLIIL IIISLFLKKQ NYELLIVLYI 180 TCRCIALLYN SFHCKEITKA IKINRYPPIE ELKKNIGCGL ILAFSNVSSM LILGIGRFFI 240 DVNFGIIEFG KVSFSIIMIN FFIVFMSQIS IVIFPVLRRV DSNNLKLYFV KFNRILTAFL 300 PIIFLLYTPI YFFVNHWIPD YKDSLFYFIF LFPLCCYEGK MQMLNNTFMK VLREEKKLLL 360 FNIISCIISI VLTLVSIYIF HSITIVVLSM LIALCIRSSI TELFLSYKYA VVIRNDVLLL 420 WGLTVIFIIL HVYLSIFLAS FTFLCLYCIY LLKYKDCVVA LKVNMRWIK 469
Protein Structure Viewer
Confidence Score (pLDDT)
Very Low (<50)
Low (50-70)
High (70-90)
Very High (>90)
Low Confidence
High Confidence
Structural Homologs -
AFDB
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| AF-A0A1A7SN45-F1-model_v4 | 12 | 469 | 11 | 466 | 0.839 |
0.8837 |
| AF-Q5FAD8-F1-model_v4 | 3 | 468 | 1 | 466 | 0.835 |
0.8631 |
| AF-Q2G262-F1-model_v4 | 3 | 469 | 1 | 474 | 0.8177 |
0.8434 |
| AF-Q58467-F1-model_v4 | 1 | 469 | 1 | 507 | 0.8145 |
0.8624 |
| AF-P37746-F1-model_v4 | 1 | 412 | 1 | 414 | 0.8089 |
0.8795 |
| AF-P71399-F1-model_v4 | 5 | 410 | 1 | 399 | 0.8044 |
0.8859 |
| AF-Q8DPI1-F1-model_v4 | 3 | 466 | 1 | 486 | 0.8041 |
0.8517 |
| AF-A0A0H3GSJ3-F1-model_v4 | 6 | 468 | 1 | 476 | 0.801 |
0.8365 |
| AF-Q32EG2-F1-model_v4 | 9 | 407 | 3 | 396 | 0.7948 |
0.8806 |
| AF-H9L497-F1-model_v4 | 2 | 469 | 1 | 479 | 0.7923 |
0.8281 |
Structural Homologs -
CAZyme3D-Whole
| Target | CAZyme Family | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|---|
| AF-A0A160T089-F1-model_v4 | GT4 | 2 | 469 | 1 | 506 | 0.7708 |
0.8245 |
| AF-A0A160T2N7-F1-model_v4 | GT28 | 1 | 469 | 35 | 544 | 0.7396 |
0.8101 |
| QNU38870.1 | GT4 | 5 | 468 | 1 | 471 | 0.7079 |
0.8159 |
| AF-F9ZKY1-F1-model_v4 | GT2 | 1 | 469 | 15 | 516 | 0.6452 |
0.8384 |
| A0A543Z557 | GH16_5 | 1 | 439 | 8 | 466 | 0.645 |
0.8465 |
| A0A0J6W0G8 | GH16_3 | 1 | 435 | 16 | 467 | 0.6366 |
0.8272 |
| QJC17489.1 | GT2 | 1 | 468 | 125 | 839 | 0.6308 |
0.8191 |
| AF-A0A3T0RPT8-F1-model_v4 | GT4 | 1 | 469 | 1 | 567 | 0.6306 |
0.8179 |
| AF-A0A517ZC93-F1-model_v4 | GT4 | 4 | 469 | 20 | 508 | 0.6263 |
0.8553 |
| AF-A0A286EL56-F1-model_v4 | GT4 | 1 | 469 | 1 | 526 | 0.6242 |
0.808 |
Structural Homologs -
CAZyme-ID50
| Target | CAZyme Family | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|---|
| A0A160T089 | GT4 | 2 | 469 | 1 | 506 | 0.7708 |
0.8245 |
| A0A160T2N7 | GT28 | 1 | 469 | 35 | 544 | 0.7396 |
0.8101 |
| QNU38870.1 | GT4 | 5 | 468 | 1 | 471 | 0.7079 |
0.8159 |
| F9ZKY1 | GT2 | 1 | 469 | 15 | 516 | 0.6452 |
0.8384 |
| A0A543Z557 | GH16_5 | 1 | 439 | 8 | 466 | 0.645 |
0.8465 |
| A0A0J6W0G8 | GH16_3 | 1 | 435 | 16 | 467 | 0.6366 |
0.8272 |
| QJC17489.1 | GT2 | 1 | 468 | 125 | 839 | 0.6308 |
0.8191 |
| A0A3T0RPT8 | GT4 | 1 | 469 | 1 | 567 | 0.6306 |
0.8179 |
| A0A517ZC93 | GT4 | 4 | 469 | 20 | 508 | 0.6263 |
0.8553 |
| A0A836MCF6 | GT100 | 5 | 411 | 1 | 400 | 0.624 |
0.8791 |
Structural Homologs -
PDB
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| 6nc6-assembly2.cif.gz_B | 12 | 463 | 1 | 461 | 0.7554 |
0.7949 |
| 6fhz-assembly1.cif.gz_A | 12 | 411 | 10 | 434 | 0.7388 |
0.8509 |
| 7waw-assembly1.cif.gz_A | 13 | 465 | 1 | 496 | 0.7312 |
0.794 |
| 7wag-assembly1.cif.gz_A | 8 | 469 | 4 | 510 | 0.7074 |
0.7732 |
| 4mlb-assembly1.cif.gz_C | 1 | 410 | 2 | 444 | 0.6491 |
0.7453 |
| 3wbn-assembly1.cif.gz_A | 1 | 410 | 1 | 442 | 0.6426 |
0.7381 |
| 3w4t-assembly1.cif.gz_A | 1 | 410 | 1 | 441 | 0.6322 |
0.7247 |
| 3vvo-assembly1.cif.gz_A | 1 | 410 | 1 | 440 | 0.6149 |
0.7058 |
| 3vvp-assembly1.cif.gz_A | 1 | 410 | 1 | 416 | 0.598 |
0.6705 |
Structural Homologs -
SwissProt
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| AF-Q58467-F1-model_v4 | 1 | 469 | 1 | 507 | 0.8145 |
0.8624 |
| AF-P37781-F1-model_v4 | 5 | 412 | 1 | 416 | 0.8121 |
0.8929 |
| AF-P37746-F1-model_v4 | 1 | 412 | 1 | 414 | 0.8089 |
0.8795 |
| AF-P71399-F1-model_v4 | 5 | 410 | 1 | 399 | 0.8044 |
0.8859 |
| AF-P33699-F1-model_v4 | 1 | 469 | 3 | 484 | 0.802 |
0.8417 |
| AF-Q48457-F1-model_v4 | 2 | 469 | 1 | 484 | 0.8018 |
0.8362 |
| AF-P39855-F1-model_v4 | 8 | 409 | 1 | 396 | 0.7971 |
0.8786 |
| AF-D4GU68-F1-model_v4 | 3 | 469 | 1 | 469 | 0.795 |
0.8192 |
| AF-Q03583-F1-model_v4 | 9 | 407 | 3 | 396 | 0.7928 |
0.8784 |
| AF-Q9CNC5-F1-model_v4 | 5 | 410 | 1 | 399 | 0.789 |
0.8692 |