PROTEIN: Rep_553_c_47_22
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Protein File & Metadata
Source:
Rep_553_c_47_22.pdb
Genome ID:
Protein ID:
Rep_553_c_47_22
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Protein Sequence
MLYILLFFVL ILLGLSYRRN KSFLFVPSIM CIASFVIGLI FLSIKIDYLG YKISIETVFF 60 ILFGLSSVFL GEYITKVSSY LSKRELSIRK SWLNIIEFRI NKKISVVLFI INCIVTYLFS 120 KEIIRIAFLA ELTSLGNFSE IMASYRTAMM FGDSINFNIS PVVSQLQKIV TISSYLYLFV 180 FIANVTKGMK LKSNIMNIIV VLPYFVITYL SGGRIGFIKI LIAILLFIYI CCFLEFEKRK 240 FIYFFSKFKI YVILSFVGIL LVFYSLRIAL GRLSSEDAKF SDYITMYIGV PILNFDLYLK 300 DNKSYSFNIS KSETFNGISV FINKLEGDKV NIGLPFKYTK RGESLGNVYT SFRRYHHDFG 360 IFGVFMMPFL MSFILSKILN IAFFKSYNSK SFSFLIILYG YLYAALPTYA AEDIFFIRLN 420 IGFIEEILLL YIMNRYLIKS IYAFK 445
Protein Structure Viewer
Confidence Score (pLDDT)
Very Low (<50)
Low (50-70)
High (70-90)
Very High (>90)
Low Confidence
High Confidence
Structural Homologs -
AFDB
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| AF-Q32EG1-F1-model_v4 | 1 | 444 | 1 | 380 | 0.767 |
0.8443 |
| AF-P37748-F1-model_v4 | 1 | 442 | 1 | 388 | 0.741 |
0.8135 |
| AF-Q329X2-F1-model_v4 | 1 | 441 | 8 | 439 | 0.6711 |
0.716 |
Structural Homologs -
CAZyme3D-Whole
| Target | CAZyme Family | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|---|
| UVP94250.1 | GT4 | 1 | 441 | 2 | 449 | 0.5604 |
0.7367 |
Structural Homologs -
CAZyme-ID50
| Target | CAZyme Family | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|---|
| UVP94250.1 | GT4 | 1 | 441 | 2 | 449 | 0.5604 |
0.7367 |
| A0A6I5WLM1 | GT4 | 1 | 443 | 46 | 476 | 0.5339 |
0.7385 |
Structural Homologs - PDB
No structural homologs were found using the cutoff E-value 1e-5 and TM-score threshold > 0.45.
Structural Homologs -
SwissProt
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| AF-P37748-F1-model_v4 | 1 | 442 | 1 | 388 | 0.741 |
0.8135 |
| AF-Q03584-F1-model_v4 | 16 | 444 | 16 | 380 | 0.7206 |
0.823 |
| AF-B4TB26-F1-model_v4 | 1 | 441 | 8 | 439 | 0.672 |
0.7183 |
| AF-B2VG51-F1-model_v4 | 1 | 441 | 8 | 438 | 0.6714 |
0.7228 |
| AF-Q329X2-F1-model_v4 | 1 | 441 | 8 | 439 | 0.6711 |
0.716 |
| AF-B4TNU6-F1-model_v4 | 1 | 441 | 8 | 439 | 0.6705 |
0.7172 |