Genome Details
Selected Rep_genome_ID: Rep_541
Total Genomes Found: 1
Total Genomes Found: 1
Read Mapping - JBrowse
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Bacteroides
Species
Bacteroides massiliensis
Genomes Table
| Genome ID | Genome Length | Completeness | Contamination | Country | Continent | Source |
|---|---|---|---|---|---|---|
| Rep_541 | 3,250,001 | 98.513% | 0% | NA | NA | WIS |
Analysis Charts
CGCs
| Gene Cluster ID | Family Name | In Labeled Family | Gene Count | CAZyme Count | Substrate |
|---|---|---|---|---|---|
| Rep_541_CGC19 | CGCFAM_00001 | Yes | 4 | 1 | pectin/galactan/beta-glucan/xylan/beta-mannan/host glycan |
| Rep_541_CGC18 | CGCFAM_00017 | Yes | 9 | 2 | fructan |
| Rep_541_CGC12 | CGCFAM_00059 | Yes | 4 | 1 | |
| Rep_541_CGC10 | CGCFAM_00095 | Yes | 7 | 3 | |
| Rep_541_CGC24 | CGCFAM_00219 | Yes | 6 | 3 | host glycan |
| Rep_541_CGC15 | CGCFAM_00296 | Yes | 13 | 5 | |
| Rep_541_CGC32 | CGCFAM_00525 | Yes | 4 | 1 | |
| Rep_541_CGC50 | CGCFAM_00567 | Yes | 4 | 2 | |
| Rep_541_CGC26 | CGCFAM_00602 | Yes | 4 | 1 | |
| Rep_541_CGC2 | CGCFAM_00635 | Yes | 4 | 1 | |
| Rep_541_CGC31 | CGCFAM_00676 | Yes | 10 | 4 | |
| Rep_541_CGC8 | CGCFAM_00823 | Yes | 16 | 11 | |
| Rep_541_CGC16 | CGCFAM_01107 | Yes | 19 | 2 | |
| Rep_541_CGC33 | CGCFAM_01517 | Yes | 8 | 3 | |
| Rep_541_CGC44 | CGCFAM_01788 | Yes | 4 | 1 | |
| Rep_541_CGC21 | CGCFAM_04215 | Yes | 6 | 2 | |
| Rep_541_CGC34 | CGCFAM_04336 | Yes | 4 | 1 | |
| Rep_541_CGC9 | CGCFAM_05470 | Yes | 6 | 4 | |
| Rep_541_CGC20 | CGCFAM_07320 | Yes | 11 | 7 | |
| Rep_541_CGC3 | CGCFAM_11011 | Yes | 8 | 3 | |
| Rep_541_CGC46 | CGCFAM_11012 | Yes | 12 | 1 | |
| Rep_541_CGC11 | CGCFAM_11013 | Yes | 11 | 2 |
Top CAZyme Families