Cluster: Rep_541_CGC44
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 1
- Substrate:
- Genome ID: Rep_541
- CGC Family ID: CGCFAM_01788
- Continent: NA
- Source Study: Leviatan et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | Rep_541_c_31 | Rep_541_c_31_7 | 7820 | 8590 | - | 3.A.1.27.4 |
| TC | Rep_541_c_31 | Rep_541_c_31_8 | 8624 | 9367 | - | 3.A.1.27.2 |
| TC | Rep_541_c_31 | Rep_541_c_31_9 | 9445 | 10200 | + | 1.B.42.1.2 |
| CAZyme | Rep_541_c_31 | Rep_541_c_31_10 | 10280 | 12502 | + | GH84 |
Gene ID: Rep_541_c_31_7
Type: TC
Location: 7820 - 8590 (-)
Type: TC
Location: 7820 - 8590 (-)
Gene ID: Rep_541_c_31_8
Type: TC
Location: 8624 - 9367 (-)
Type: TC
Location: 8624 - 9367 (-)
Gene ID: Rep_541_c_31_9
Type: TC
Location: 9445 - 10200 (+)
Type: TC
Location: 9445 - 10200 (+)
Gene ID: Rep_541_c_31_10
Type: CAZyme
Location: 10280 - 12502 (+)
Type: CAZyme
Location: 10280 - 12502 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Bacteroides
Species
Bacteroides massiliensis
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.