Cluster: Rep_541_CGC24
🧬 Cluster Details
- Gene Count: 6
- CAZyme Count: 3
- Substrate: host glycan
- Genome ID: Rep_541
- CGC Family ID: CGCFAM_00219
- Continent: NA
- Source Study: Leviatan et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | Rep_541_c_7 | Rep_541_c_7_85 | 98299 | 100296 | - | PL12_2 |
| CAZyme | Rep_541_c_7 | Rep_541_c_7_86 | 100322 | 101611 | - | GH88 |
| NULL(UNKNOWN) | Rep_541_c_7 | Rep_541_c_7_87 | 101682 | 101792 | + |
NULL(UNKNOWN)
[View Structural Homologs] |
| TC | Rep_541_c_7 | Rep_541_c_7_88 | 101801 | 103567 | - | 8.A.46.1.3 |
| TC | Rep_541_c_7 | Rep_541_c_7_89 | 103594 | 106788 | - | 1.B.14.6.1 |
| CAZyme | Rep_541_c_7 | Rep_541_c_7_90 | 107190 | 109514 | - | PL21_1 |
Gene ID: Rep_541_c_7_85
Type: CAZyme
Location: 98299 - 100296 (-)
Type: CAZyme
Location: 98299 - 100296 (-)
Gene ID: Rep_541_c_7_86
Type: CAZyme
Location: 100322 - 101611 (-)
Type: CAZyme
Location: 100322 - 101611 (-)
Gene ID: Rep_541_c_7_87
Type:
Location: 101682 - 101792 (+)
Type:
Location: 101682 - 101792 (+)
Gene ID: Rep_541_c_7_88
Type: TC
Location: 101801 - 103567 (-)
Type: TC
Location: 101801 - 103567 (-)
Gene ID: Rep_541_c_7_89
Type: TC
Location: 103594 - 106788 (-)
Type: TC
Location: 103594 - 106788 (-)
Gene ID: Rep_541_c_7_90
Type: CAZyme
Location: 107190 - 109514 (-)
Type: CAZyme
Location: 107190 - 109514 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Bacteroides
Species
Bacteroides massiliensis
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.