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Cluster: Rep_541_CGC31

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC Rep_541_c_12 Rep_541_c_12_35 38615 39430 + 2.A.64.3.2
NULL(UNKNOWN) Rep_541_c_12 Rep_541_c_12_36 39542 39661 + NULL(UNKNOWN)
[View Structural Homologs]
pfam Rep_541_c_12 Rep_541_c_12_37 39758 43153 + AAA_11 | AAA_11 | AAA_12 | AAA_19 | AAA_30
TC Rep_541_c_12 Rep_541_c_12_38 43402 44940 - 2.A.1.14.25
pfam Rep_541_c_12 Rep_541_c_12_39 45085 45984 - KduI
TC Rep_541_c_12 Rep_541_c_12_40 46053 47423 - 4.A.5.1.2
CAZyme Rep_541_c_12 Rep_541_c_12_41 47716 48738 + CE8
CAZyme Rep_541_c_12 Rep_541_c_12_42 48793 50544 + CE12 | CE8
CAZyme Rep_541_c_12 Rep_541_c_12_43 51078 52388 + CE7
CAZyme Rep_541_c_12 Rep_541_c_12_44 52390 53544 - CE19
Gene ID: Rep_541_c_12_35
Type: TC
Location: 38615 - 39430 (+)
Gene ID: Rep_541_c_12_36
Type:
Location: 39542 - 39661 (+)
Gene ID: Rep_541_c_12_37
Type: pfam
Location: 39758 - 43153 (+)
Gene ID: Rep_541_c_12_38
Type: TC
Location: 43402 - 44940 (-)
Gene ID: Rep_541_c_12_39
Type: pfam
Location: 45085 - 45984 (-)
Gene ID: Rep_541_c_12_40
Type: TC
Location: 46053 - 47423 (-)
Gene ID: Rep_541_c_12_41
Type: CAZyme
Location: 47716 - 48738 (+)
Gene ID: Rep_541_c_12_42
Type: CAZyme
Location: 48793 - 50544 (+)
Gene ID: Rep_541_c_12_43
Type: CAZyme
Location: 51078 - 52388 (+)
Gene ID: Rep_541_c_12_44
Type: CAZyme
Location: 52390 - 53544 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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