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Cluster: Rep_541_CGC33

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC Rep_541_c_13 Rep_541_c_13_47 65793 67028 + 3.B.1.1.5
CAZyme Rep_541_c_13 Rep_541_c_13_48 67148 69457 - GH65
TC Rep_541_c_13 Rep_541_c_13_49 69590 70954 - 2.A.2.6.2
TF Rep_541_c_13 Rep_541_c_13_50 70990 71994 - LacI
CAZyme Rep_541_c_13 Rep_541_c_13_51 72288 73466 + GH53
CAZyme Rep_541_c_13 Rep_541_c_13_52 73486 75951 + GH2
TC Rep_541_c_13 Rep_541_c_13_53 76395 79469 + 1.B.14.6.1
TC Rep_541_c_13 Rep_541_c_13_54 79490 81109 + 8.A.46.1.1
Gene ID: Rep_541_c_13_47
Type: TC
Location: 65793 - 67028 (+)
Gene ID: Rep_541_c_13_48
Type: CAZyme
Location: 67148 - 69457 (-)
Gene ID: Rep_541_c_13_49
Type: TC
Location: 69590 - 70954 (-)
Gene ID: Rep_541_c_13_50
Type: TF
Location: 70990 - 71994 (-)
Gene ID: Rep_541_c_13_51
Type: CAZyme
Location: 72288 - 73466 (+)
Gene ID: Rep_541_c_13_52
Type: CAZyme
Location: 73486 - 75951 (+)
Gene ID: Rep_541_c_13_53
Type: TC
Location: 76395 - 79469 (+)
Gene ID: Rep_541_c_13_54
Type: TC
Location: 79490 - 81109 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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