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Cluster: Rep_541_CGC20

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme Rep_541_c_6 Rep_541_c_6_69 93800 96895 - GH2
CAZyme Rep_541_c_6 Rep_541_c_6_70 97020 98957 - GH51_2
CAZyme Rep_541_c_6 Rep_541_c_6_71 98969 100984 - GH127
CAZyme Rep_541_c_6 Rep_541_c_6_72 101012 103531 - GH51_2
CAZyme Rep_541_c_6 Rep_541_c_6_73 103579 105522 - GH97
pfam Rep_541_c_6 Rep_541_c_6_74 105782 106915 + Radical_SAM | HemN_C
CAZyme Rep_541_c_6 Rep_541_c_6_75 107380 109116 - GH29
CAZyme Rep_541_c_6 Rep_541_c_6_76 109157 111070 - GH97
pfam Rep_541_c_6 Rep_541_c_6_77 111092 112120 - ADH_zinc_N | AlaDh_PNT_C | ADH_N | ADH_zinc_N_2 | Glu_dehyd_C
pfam Rep_541_c_6 Rep_541_c_6_78 112128 113054 - Amidohydro_2
TC Rep_541_c_6 Rep_541_c_6_79 113070 114002 - 8.A.5.1.6
Gene ID: Rep_541_c_6_69
Type: CAZyme
Location: 93800 - 96895 (-)
Gene ID: Rep_541_c_6_70
Type: CAZyme
Location: 97020 - 98957 (-)
Gene ID: Rep_541_c_6_71
Type: CAZyme
Location: 98969 - 100984 (-)
Gene ID: Rep_541_c_6_72
Type: CAZyme
Location: 101012 - 103531 (-)
Gene ID: Rep_541_c_6_73
Type: CAZyme
Location: 103579 - 105522 (-)
Gene ID: Rep_541_c_6_74
Type: pfam
Location: 105782 - 106915 (+)
Gene ID: Rep_541_c_6_75
Type: CAZyme
Location: 107380 - 109116 (-)
Gene ID: Rep_541_c_6_76
Type: CAZyme
Location: 109157 - 111070 (-)
Gene ID: Rep_541_c_6_77
Type: pfam
Location: 111092 - 112120 (-)
Gene ID: Rep_541_c_6_78
Type: pfam
Location: 112128 - 113054 (-)
Gene ID: Rep_541_c_6_79
Type: TC
Location: 113070 - 114002 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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