Genome Details
Selected Rep_genome_ID: Rep_3001
Total Genomes Found: 1
Total Genomes Found: 1
Read Mapping - JBrowse
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Christensenellales
Family
UBA1750
Genus
Spyradocola
Species
Spyradocola merdavium
Genomes Table
| Genome ID | Genome Length | Completeness | Contamination | Country | Continent | Source |
|---|---|---|---|---|---|---|
| Rep_3001 | 2,844,425 | 99.1675% | 0.806452% | NA | NA | WIS |
Analysis Charts
CGCs
| Gene Cluster ID | Family Name | In Labeled Family | Gene Count | CAZyme Count | Substrate |
|---|---|---|---|---|---|
| Rep_3001_CGC13 | CGCFAM_00004 | Yes | 11 | 5 | alpha-glucan |
| Rep_3001_CGC26 | CGCFAM_00541 | Yes | 3 | 1 | |
| Rep_3001_CGC25 | CGCFAM_01026 | Yes | 8 | 1 | |
| Rep_3001_CGC1 | CGCFAM_01204 | Yes | 7 | 1 | |
| Rep_3001_CGC28 | CGCFAM_01246 | Yes | 5 | 1 | |
| Rep_3001_CGC2 | CGCFAM_02044 | Yes | 4 | 1 | |
| Rep_3001_CGC4 | CGCFAM_03407 | Yes | 5 | 1 | |
| Rep_3001_CGC11 | CGCFAM_05674 | Yes | 4 | 1 | |
| Rep_3001_CGC18 | CGCFAM_06284 | Yes | 4 | 1 | |
| Rep_3001_CGC27 | CGCFAM_09840 | Yes | 6 | 1 | |
| Rep_3001_CGC22 | CGCFAM_11062 | Yes | 5 | 1 | |
| Rep_3001_CGC7 | CGCFAM_11228 | Yes | 12 | 1 |
Top CAZyme Families