Cluster: Rep_3001_CGC2
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 1
- Substrate:
- Genome ID: Rep_3001
- CGC Family ID: CGCFAM_02044
- Continent: NA
- Source Study: Leviatan et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | Rep_3001_c_1 | Rep_3001_c_1_49 | 43542 | 44105 | - | 2.A.107.1.2 |
| STP | Rep_3001_c_1 | Rep_3001_c_1_50 | 44214 | 44666 | - | HATPase_c |
| STP | Rep_3001_c_1 | Rep_3001_c_1_51 | 44688 | 44987 | - | STAS |
| CAZyme | Rep_3001_c_1 | Rep_3001_c_1_52 | 45148 | 47583 | + | GT51 |
Gene ID: Rep_3001_c_1_49
Type: TC
Location: 43542 - 44105 (-)
Type: TC
Location: 43542 - 44105 (-)
Gene ID: Rep_3001_c_1_50
Type: STP
Location: 44214 - 44666 (-)
Type: STP
Location: 44214 - 44666 (-)
Gene ID: Rep_3001_c_1_51
Type: STP
Location: 44688 - 44987 (-)
Type: STP
Location: 44688 - 44987 (-)
Gene ID: Rep_3001_c_1_52
Type: CAZyme
Location: 45148 - 47583 (+)
Type: CAZyme
Location: 45148 - 47583 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Christensenellales
Family
UBA1750
Genus
Spyradocola
Species
Spyradocola merdavium
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.