Cluster: Rep_3001_CGC22
🧬 Cluster Details
- Gene Count: 5
- CAZyme Count: 1
- Substrate:
- Genome ID: Rep_3001
- CGC Family ID: CGCFAM_11062
- Continent: NA
- Source Study: Leviatan et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | Rep_3001_c_27 | Rep_3001_c_27_31 | 26677 | 27492 | - | CE1 |
| peptidase | Rep_3001_c_27 | Rep_3001_c_27_32 | 27529 | 28614 | - | C59.UPW |
| TF | Rep_3001_c_27 | Rep_3001_c_27_33 | 28659 | 29591 | - | HTH_1 |
| TC | Rep_3001_c_27 | Rep_3001_c_27_34 | 29725 | 31449 | + | 3.A.1.135.5 |
| TC | Rep_3001_c_27 | Rep_3001_c_27_35 | 31451 | 33205 | + | 3.A.1.135.5 |
Gene ID: Rep_3001_c_27_31
Type: CAZyme
Location: 26677 - 27492 (-)
Type: CAZyme
Location: 26677 - 27492 (-)
Gene ID: Rep_3001_c_27_32
Type: peptidase
Location: 27529 - 28614 (-)
Type: peptidase
Location: 27529 - 28614 (-)
Gene ID: Rep_3001_c_27_33
Type: TF
Location: 28659 - 29591 (-)
Type: TF
Location: 28659 - 29591 (-)
Gene ID: Rep_3001_c_27_34
Type: TC
Location: 29725 - 31449 (+)
Type: TC
Location: 29725 - 31449 (+)
Gene ID: Rep_3001_c_27_35
Type: TC
Location: 31451 - 33205 (+)
Type: TC
Location: 31451 - 33205 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Christensenellales
Family
UBA1750
Genus
Spyradocola
Species
Spyradocola merdavium
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
Loading chart...
No differentially abundant genes found in the 2019 study.