Cluster: Rep_3001_CGC11
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 1
- Substrate:
- Genome ID: Rep_3001
- CGC Family ID: CGCFAM_05674
- Continent: NA
- Source Study: Leviatan et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | Rep_3001_c_10 | Rep_3001_c_10_41 | 39305 | 41539 | + | 3.A.7.16.1 |
| STP | Rep_3001_c_10 | Rep_3001_c_10_42 | 41536 | 42318 | + | Pribosyltran |
| TF | Rep_3001_c_10 | Rep_3001_c_10_43 | 42341 | 42598 | - | HTH_3 |
| CAZyme | Rep_3001_c_10 | Rep_3001_c_10_44 | 42790 | 44928 | - | GH3 |
Gene ID: Rep_3001_c_10_41
Type: TC
Location: 39305 - 41539 (+)
Type: TC
Location: 39305 - 41539 (+)
Gene ID: Rep_3001_c_10_42
Type: STP
Location: 41536 - 42318 (+)
Type: STP
Location: 41536 - 42318 (+)
Gene ID: Rep_3001_c_10_43
Type: TF
Location: 42341 - 42598 (-)
Type: TF
Location: 42341 - 42598 (-)
Gene ID: Rep_3001_c_10_44
Type: CAZyme
Location: 42790 - 44928 (-)
Type: CAZyme
Location: 42790 - 44928 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Christensenellales
Family
UBA1750
Genus
Spyradocola
Species
Spyradocola merdavium
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.