Cluster: Rep_3001_CGC26
🧬 Cluster Details
- Gene Count: 3
- CAZyme Count: 1
- Substrate:
- Genome ID: Rep_3001
- CGC Family ID: CGCFAM_00541
- Continent: NA
- Source Study: Leviatan et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | Rep_3001_c_36 | Rep_3001_c_36_21 | 19836 | 22961 | - | GH38 |
| TF | Rep_3001_c_36 | Rep_3001_c_36_22 | 23208 | 24329 | + | GntR |
| TC | Rep_3001_c_36 | Rep_3001_c_36_23 | 24704 | 25540 | + | 3.A.1.1.10 |
Gene ID: Rep_3001_c_36_21
Type: CAZyme
Location: 19836 - 22961 (-)
Type: CAZyme
Location: 19836 - 22961 (-)
Gene ID: Rep_3001_c_36_22
Type: TF
Location: 23208 - 24329 (+)
Type: TF
Location: 23208 - 24329 (+)
Gene ID: Rep_3001_c_36_23
Type: TC
Location: 24704 - 25540 (+)
Type: TC
Location: 24704 - 25540 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Christensenellales
Family
UBA1750
Genus
Spyradocola
Species
Spyradocola merdavium
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.