Genome Details
Selected Rep_genome_ID: Rep_2406
Total Genomes Found: 2
Total Genomes Found: 2
Read Mapping - JBrowse
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Porcincola
Species
Porcincola sp902800805
Genomes Table
| Genome ID | Genome Length | Completeness | Contamination | Country | Continent | Source |
|---|---|---|---|---|---|---|
| Rep_2406 | 2,369,746 | 95.2321% | 0.949367% | NA | NA | WIS |
| SW026_63 | 2,743,799 | 96.84% | 1.48% | NA | Africa | H3AfricaPhase2 |
Analysis Charts
CGCs
| Gene Cluster ID | Family Name | In Labeled Family | Gene Count | CAZyme Count | Substrate |
|---|---|---|---|---|---|
| Rep_2406_CGC25 | CGCFAM_00009 | Yes | 5 | 3 | |
| Rep_2406_CGC19 | CGCFAM_00190 | Yes | 4 | 1 | |
| Rep_2406_CGC5 | CGCFAM_01087 | Yes | 7 | 3 | |
| Rep_2406_CGC12 | CGCFAM_01186 | Yes | 4 | 1 | |
| Rep_2406_CGC13 | CGCFAM_01395 | Yes | 4 | 2 | |
| Rep_2406_CGC3 | CGCFAM_02176 | Yes | 3 | 2 | |
| Rep_2406_CGC6 | CGCFAM_03211 | Yes | 4 | 1 | |
| Rep_2406_CGC18 | CGCFAM_03381 | Yes | 9 | 1 | |
| Rep_2406_CGC4 | CGCFAM_03637 | Yes | 4 | 1 | |
| Rep_2406_CGC29 | CGCFAM_07958 | Yes | 10 | 1 | |
| Rep_2406_CGC9 | CGCFAM_08953 | Yes | 4 | 1 | |
| Rep_2406_CGC15 | CGCFAM_09048 | Yes | 3 | 1 | |
| Rep_2406_CGC10 | CGCFAM_11028 | Yes | 3 | 1 |
Top CAZyme Families