Cluster: Rep_2406_CGC3
🧬 Cluster Details
- Gene Count: 3
- CAZyme Count: 2
- Substrate:
- Genome ID: Rep_2406
- CGC Family ID: CGCFAM_02176
- Continent: NA
- Source Study: Leviatan et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | Rep_2406_c_38 | Rep_2406_c_38_6 | 6385 | 7779 | - | 2.A.2.3.3 |
| CAZyme | Rep_2406_c_38 | Rep_2406_c_38_7 | 7828 | 9279 | - | GH43_35 |
| CAZyme | Rep_2406_c_38 | Rep_2406_c_38_8 | 9510 | 11363 | - | GH3 |
Gene ID: Rep_2406_c_38_6
Type: TC
Location: 6385 - 7779 (-)
Type: TC
Location: 6385 - 7779 (-)
Gene ID: Rep_2406_c_38_7
Type: CAZyme
Location: 7828 - 9279 (-)
Type: CAZyme
Location: 7828 - 9279 (-)
Gene ID: Rep_2406_c_38_8
Type: CAZyme
Location: 9510 - 11363 (-)
Type: CAZyme
Location: 9510 - 11363 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Porcincola
Species
Porcincola sp902800805
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.