Cluster: Rep_2406_CGC4
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 1
- Substrate:
- Genome ID: Rep_2406
- CGC Family ID: CGCFAM_03637
- Continent: NA
- Source Study: Leviatan et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | Rep_2406_c_46 | Rep_2406_c_46_11 | 10103 | 11437 | - | 2.A.45.2.2 |
| TC | Rep_2406_c_46 | Rep_2406_c_46_12 | 11791 | 13146 | - | 1.A.26.1.2 |
| NULL(UNKNOWN) | Rep_2406_c_46 | Rep_2406_c_46_13 | 13250 | 13747 | + |
NULL(UNKNOWN)
[View Structural Homologs] |
| CAZyme | Rep_2406_c_46 | Rep_2406_c_46_14 | 13668 | 15488 | - | GT35 |
Gene ID: Rep_2406_c_46_11
Type: TC
Location: 10103 - 11437 (-)
Type: TC
Location: 10103 - 11437 (-)
Gene ID: Rep_2406_c_46_12
Type: TC
Location: 11791 - 13146 (-)
Type: TC
Location: 11791 - 13146 (-)
Gene ID: Rep_2406_c_46_13
Type:
Location: 13250 - 13747 (+)
Type:
Location: 13250 - 13747 (+)
Gene ID: Rep_2406_c_46_14
Type: CAZyme
Location: 13668 - 15488 (-)
Type: CAZyme
Location: 13668 - 15488 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Porcincola
Species
Porcincola sp902800805
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
Loading chart...
No differentially abundant genes found in the 2019 study.