Cluster: Rep_2406_CGC6
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 1
- Substrate:
- Genome ID: Rep_2406
- CGC Family ID: CGCFAM_03211
- Continent: NA
- Source Study: Leviatan et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | Rep_2406_c_57 | Rep_2406_c_57_5 | 5322 | 7274 | - | CBM48 | GH13_9 |
| pfam | Rep_2406_c_57 | Rep_2406_c_57_6 | 7454 | 8614 | + | Fe-ADH | Fe-ADH_2 | ADH_Fe_C |
| TC | Rep_2406_c_57 | Rep_2406_c_57_7 | 8784 | 9347 | - | 2.A.51.1.6 |
| TC | Rep_2406_c_57 | Rep_2406_c_57_8 | 9347 | 9973 | - | 2.A.51.1.6 |
Gene ID: Rep_2406_c_57_5
Type: CAZyme
Location: 5322 - 7274 (-)
Type: CAZyme
Location: 5322 - 7274 (-)
Gene ID: Rep_2406_c_57_6
Type: pfam
Location: 7454 - 8614 (+)
Type: pfam
Location: 7454 - 8614 (+)
Gene ID: Rep_2406_c_57_7
Type: TC
Location: 8784 - 9347 (-)
Type: TC
Location: 8784 - 9347 (-)
Gene ID: Rep_2406_c_57_8
Type: TC
Location: 9347 - 9973 (-)
Type: TC
Location: 9347 - 9973 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Porcincola
Species
Porcincola sp902800805
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.