Cluster: Rep_2406_CGC15
🧬 Cluster Details
- Gene Count: 3
- CAZyme Count: 1
- Substrate:
- Genome ID: Rep_2406
- CGC Family ID: CGCFAM_09048
- Continent: NA
- Source Study: Leviatan et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | Rep_2406_c_119 | Rep_2406_c_119_2 | 576 | 1475 | + | 3.A.1.1.13 |
| TC | Rep_2406_c_119 | Rep_2406_c_119_3 | 1497 | 2333 | + | 3.A.1.1.18 |
| CAZyme | Rep_2406_c_119 | Rep_2406_c_119_4 | 2463 | 4580 | + | GH3 |
Gene ID: Rep_2406_c_119_2
Type: TC
Location: 576 - 1475 (+)
Type: TC
Location: 576 - 1475 (+)
Gene ID: Rep_2406_c_119_3
Type: TC
Location: 1497 - 2333 (+)
Type: TC
Location: 1497 - 2333 (+)
Gene ID: Rep_2406_c_119_4
Type: CAZyme
Location: 2463 - 4580 (+)
Type: CAZyme
Location: 2463 - 4580 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Porcincola
Species
Porcincola sp902800805
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.