Cluster: Rep_2406_CGC12
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 1
- Substrate:
- Genome ID: Rep_2406
- CGC Family ID: CGCFAM_01186
- Continent: NA
- Source Study: Leviatan et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | Rep_2406_c_105 | Rep_2406_c_105_10 | 11318 | 12826 | - | GH51_1 |
| TC | Rep_2406_c_105 | Rep_2406_c_105_11 | 12836 | 13657 | - | 3.A.1.1.36 |
| TC | Rep_2406_c_105 | Rep_2406_c_105_12 | 13654 | 14619 | - | 3.A.1.1.36 |
| TC | Rep_2406_c_105 | Rep_2406_c_105_13 | 14753 | 16021 | - | 3.A.1.1.3 |
Gene ID: Rep_2406_c_105_10
Type: CAZyme
Location: 11318 - 12826 (-)
Type: CAZyme
Location: 11318 - 12826 (-)
Gene ID: Rep_2406_c_105_11
Type: TC
Location: 12836 - 13657 (-)
Type: TC
Location: 12836 - 13657 (-)
Gene ID: Rep_2406_c_105_12
Type: TC
Location: 13654 - 14619 (-)
Type: TC
Location: 13654 - 14619 (-)
Gene ID: Rep_2406_c_105_13
Type: TC
Location: 14753 - 16021 (-)
Type: TC
Location: 14753 - 16021 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Porcincola
Species
Porcincola sp902800805
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.