Genome Details
Selected Rep_genome_ID: Rep_224
Total Genomes Found: 1
Total Genomes Found: 1
Read Mapping - JBrowse
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Prevotella
Genomes Table
| Genome ID | Genome Length | Completeness | Contamination | Country | Continent | Source |
|---|---|---|---|---|---|---|
| Rep_224 | 2,926,962 | 95.7671% | 1.01351% | NA | NA | WIS |
Analysis Charts
CGCs
| Gene Cluster ID | Family Name | In Labeled Family | Gene Count | CAZyme Count | Substrate |
|---|---|---|---|---|---|
| Rep_224_CGC11 | CGCFAM_00001 | Yes | 7 | 1 | pectin/galactan/beta-glucan/xylan/beta-mannan/host glycan |
| Rep_224_CGC13 | CGCFAM_00001 | Yes | 7 | 2 | pectin/galactan/beta-glucan/xylan/beta-mannan/host glycan |
| Rep_224_CGC16 | CGCFAM_00032 | Yes | 4 | 2 | |
| Rep_224_CGC9 | CGCFAM_00108 | Yes | 7 | 2 | pectin |
| Rep_224_CGC45 | CGCFAM_00181 | Yes | 8 | 1 | |
| Rep_224_CGC5 | CGCFAM_00225 | Yes | 6 | 4 | arabinogalactan |
| Rep_224_CGC46 | CGCFAM_00273 | Yes | 11 | 6 | xylan |
| Rep_224_CGC32 | CGCFAM_00296 | Yes | 8 | 5 | |
| Rep_224_CGC29 | CGCFAM_00468 | Yes | 11 | 1 | |
| Rep_224_CGC17 | CGCFAM_00862 | Yes | 8 | 3 | |
| Rep_224_CGC43 | CGCFAM_01077 | Yes | 11 | 4 | |
| Rep_224_CGC3 | CGCFAM_01415 | Yes | 5 | 2 | |
| Rep_224_CGC37 | CGCFAM_01612 | Yes | 8 | 1 | |
| Rep_224_CGC35 | CGCFAM_01686 | Yes | 7 | 5 | |
| Rep_224_CGC22 | CGCFAM_02828 | Yes | 5 | 2 | |
| Rep_224_CGC1 | CGCFAM_03982 | Yes | 3 | 2 | |
| Rep_224_CGC8 | CGCFAM_10899 | Yes | 5 | 1 | |
| Rep_224_CGC30 | CGCFAM_11247 | Yes | 13 | 2 |
Top CAZyme Families