Cluster: Rep_224_CGC22
🧬 Cluster Details
- Gene Count: 5
- CAZyme Count: 2
- Substrate:
- Genome ID: Rep_224
- CGC Family ID: CGCFAM_02828
- Continent: NA
- Source Study: Leviatan et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | Rep_224_c_61 | Rep_224_c_61_14 | 16144 | 17226 | - | 2.A.109.1.7 |
| NULL(UNKNOWN) | Rep_224_c_61 | Rep_224_c_61_15 | 17458 | 18300 | + |
NULL(UNKNOWN)
[View Structural Homologs] |
| NULL(UNKNOWN) | Rep_224_c_61 | Rep_224_c_61_16 | 18627 | 18728 | + |
NULL(UNKNOWN)
[View Structural Homologs] |
| CAZyme | Rep_224_c_61 | Rep_224_c_61_17 | 18909 | 20477 | + | GH30_4 |
| CAZyme | Rep_224_c_61 | Rep_224_c_61_18 | 20602 | 22938 | + | GH35 |
Gene ID: Rep_224_c_61_14
Type: TC
Location: 16144 - 17226 (-)
Type: TC
Location: 16144 - 17226 (-)
Gene ID: Rep_224_c_61_15
Type:
Location: 17458 - 18300 (+)
Type:
Location: 17458 - 18300 (+)
Gene ID: Rep_224_c_61_16
Type:
Location: 18627 - 18728 (+)
Type:
Location: 18627 - 18728 (+)
Gene ID: Rep_224_c_61_17
Type: CAZyme
Location: 18909 - 20477 (+)
Type: CAZyme
Location: 18909 - 20477 (+)
Gene ID: Rep_224_c_61_18
Type: CAZyme
Location: 20602 - 22938 (+)
Type: CAZyme
Location: 20602 - 22938 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Prevotella
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
Loading chart...
Differentially Abundant Genes
| Gene ID | Condition Pair | log2FC | FDR P-value |
|---|---|---|---|
| Rep_224_c_61_17 | vegetarian > omnivore | 3.72501 | 0.01882 |