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Cluster: Rep_224_CGC46

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme Rep_224_c_141 Rep_224_c_141_2 1846 4368 - GH43_2 | GH8
CAZyme Rep_224_c_141 Rep_224_c_141_3 4383 5342 - GH43_1
CAZyme Rep_224_c_141 Rep_224_c_141_4 5381 6505 - GH10
TC Rep_224_c_141 Rep_224_c_141_5 6571 7995 - 2.A.2.3.2
pfam Rep_224_c_141 Rep_224_c_141_6 8040 9263 - Lipase_GDSL | Lipase_GDSL_2
NULL(UNKNOWN) Rep_224_c_141 Rep_224_c_141_7 9332 9421 + NULL(UNKNOWN)
[View Structural Homologs]
CAZyme Rep_224_c_141 Rep_224_c_141_8 9530 11539 + GH67
CAZyme Rep_224_c_141 Rep_224_c_141_9 11727 13340 - CBM91 | GH43_10
CAZyme Rep_224_c_141 Rep_224_c_141_10 13354 15234 - CE1 | CE6
pfam Rep_224_c_141 Rep_224_c_141_11 15369 17162 - SusD_RagB | SusD-like_3
TC Rep_224_c_141 Rep_224_c_141_12 17183 20299 - 1.B.14.6.1
Gene ID: Rep_224_c_141_2
Type: CAZyme
Location: 1846 - 4368 (-)
Gene ID: Rep_224_c_141_3
Type: CAZyme
Location: 4383 - 5342 (-)
Gene ID: Rep_224_c_141_4
Type: CAZyme
Location: 5381 - 6505 (-)
Gene ID: Rep_224_c_141_5
Type: TC
Location: 6571 - 7995 (-)
Gene ID: Rep_224_c_141_6
Type: pfam
Location: 8040 - 9263 (-)
Gene ID: Rep_224_c_141_7
Type:
Location: 9332 - 9421 (+)
Gene ID: Rep_224_c_141_8
Type: CAZyme
Location: 9530 - 11539 (+)
Gene ID: Rep_224_c_141_9
Type: CAZyme
Location: 11727 - 13340 (-)
Gene ID: Rep_224_c_141_10
Type: CAZyme
Location: 13354 - 15234 (-)
Gene ID: Rep_224_c_141_11
Type: pfam
Location: 15369 - 17162 (-)
Gene ID: Rep_224_c_141_12
Type: TC
Location: 17183 - 20299 (-)

Taxonomic Lineage

Domain
Bacteria
→
Phylum
Bacteroidota
→
Class
Bacteroidia
→
Order
Bacteroidales
→
Family
Bacteroidaceae
→
Genus
Prevotella
→

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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