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Cluster: Rep_224_CGC37

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC Rep_224_c_120 Rep_224_c_120_5 3697 5745 + 1.B.14.1.20
TC Rep_224_c_120 Rep_224_c_120_6 5822 7048 + 9.B.156.3.1
pfam Rep_224_c_120 Rep_224_c_120_7 7076 8542 + Polysacc_synt | Polysacc_synt_3
peptidase Rep_224_c_120 Rep_224_c_120_8 8568 10706 + S46.UPW
CAZyme Rep_224_c_120 Rep_224_c_120_9 10865 13414 - GH2
TF Rep_224_c_120 Rep_224_c_120_10 13522 14364 - HTH_AraC
TF Rep_224_c_120 Rep_224_c_120_11 14368 15267 - HTH_AraC | HTH_AraC
TC Rep_224_c_120 Rep_224_c_120_12 15449 17332 - 3.A.18.1.1
Gene ID: Rep_224_c_120_5
Type: TC
Location: 3697 - 5745 (+)
Gene ID: Rep_224_c_120_6
Type: TC
Location: 5822 - 7048 (+)
Gene ID: Rep_224_c_120_7
Type: pfam
Location: 7076 - 8542 (+)
Gene ID: Rep_224_c_120_8
Type: peptidase
Location: 8568 - 10706 (+)
Gene ID: Rep_224_c_120_9
Type: CAZyme
Location: 10865 - 13414 (-)
Gene ID: Rep_224_c_120_10
Type: TF
Location: 13522 - 14364 (-)
Gene ID: Rep_224_c_120_11
Type: TF
Location: 14368 - 15267 (-)
Gene ID: Rep_224_c_120_12
Type: TC
Location: 15449 - 17332 (-)

Taxonomic Lineage

Domain
Bacteria
→
Phylum
Bacteroidota
→
Class
Bacteroidia
→
Order
Bacteroidales
→
Family
Bacteroidaceae
→
Genus
Prevotella
→

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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